Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3703 ATGGACGCTGCTGTATTGGAATCTCTCTCCTCCTCCGCTGCGCATTTCTCCGGTTGCCACCCTTCTTCATCCACCTCATCCTCTTCTCATAACAACGTCTTCCTCATCGGAGTCTCTGGAGGTACTGCATCCGGGAAAACCACAGTGTGTGATATGATCATTCAACAATTGCAAGATCATAGAGTTGTTCTCGTCAATCAGGATTCTTTCTACCGCGGTTTAACGAATGATGAGTCGAAACGTGTTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACAGAACAACTTGTAGAAACACTCATCAAACTTAAATCTGGACAGTCAGTTCAGGTTCCTGTTTATGATTTCAAGCTCCACCAAAGAGCTTCTGATAGATACCGACAGGTCAATGCATCTGAAGTAATCATCCTAGAGGGTATATTGGTTTTTCATGAACCACGTGTCCGTGACATGATGAACATGAAGATATTTGTCGATGCAGATCCTGATGTAAGGCTTGGCCGCAGAATTAGACGAGATACCGTCGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAGTATGCGAAATTTGTTAAGCCTGCCTTCGATGATTTTATACTTCCATCCAAAAAGTATGCTGATATTATCATACCTCGTGGGGGAGACAATTGTGTAGCAATTGACTTGATCGTTCAACATATCCACACTAAGCTTGGCCAACATTGCCTCTGTAAGATATATCCAAATTTGAATGTTATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGTGATAAGGAAATATCGAAGCATGACTTTGTTTTTTATTCAGATCGACTAATTCGTTTGGTAGTCGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAGCAAGTTACAACACCTACAGGATCAATTTATATTGGTGTTGATTTTTGTAAGAAATTGTGTGGAGTATCTGTTATTCGAAGTGGTGAAAGCATGGAAAATGCTTTGCGTGCATGTTGTAAAGGAATAAAAATAGGAAAAATTCTCATCCATCGTGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTCCCAAAAGATATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACTCTGCAAGCCAAGCAATTGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCCCGGATAATATTCCTCAACCTTGTGTCCGCTCCCGAGGGAATACATTGTGTATGTAAACATTTTCCGCACCTGAAAGTTGTTACTTCCGAGATTGATGAAGGACTAAATGATCAGTTCCGTGTCGTGCCTGGGCTAGGAGAATTTGGTGACCGATATTTTGGTACAGATGACTCCTAA 1365 0.4132 MDAAVLESLSSSAAHFSGCHPSSSTSSSSHNNVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQDSFYRGLTNDESKRVHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDRYRQVNASEVIILEGILVFHEPRVRDMMNMKIFVDADPDVRLGRRIRRDTVERGRDVHSVLEQYAKFVKPAFDDFILPSKKYADIIIPRGGDNCVAIDLIVQHIHTKLGQHCLCKIYPNLNVIQSTFQTRGMHTLIRDKEISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVTTPTGSIYIGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNSASQAIELLIKKGVPESRIIFLNLVSAPEGIHCVCKHFPHLKVVTSEIDEGLNDQFRVVPGLGEFGDRYFGTDDS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3703 454 CDD UMPK 35 233 IPR000764 -
Mtr4g3703 454 CDD PRTases_typeI 306 411 IPR000836 -
Mtr4g3703 454 SUPERFAMILY PRTase-like 237 452 IPR029057 -
Mtr4g3703 454 Gene3D - 29 237 IPR027417 -
Mtr4g3703 454 PANTHER URIDINE KINASE 17 450 - -
Mtr4g3703 454 Pfam Phosphoribulokinase / Uridine kinase family 35 221 IPR006083 GO:0005524|GO:0016301
Mtr4g3703 454 Gene3D - 238 451 IPR029057 -
Mtr4g3703 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 226 IPR027417 -
Mtr4g3703 454 PANTHER URIDINE KINASE 17 450 - -
Mtr4g3703 454 TIGRFAM udk: uridine kinase 31 233 IPR000764 -
Mtr4g3703 454 Pfam Uracil phosphoribosyltransferase 251 451 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 33 50 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 63 74 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 108 123 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 165 175 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 179 190 - -
Mtr4g3703 454 PRINTS Uridine kinase signature 201 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3703 Mtr-Chr4 50787104 50792627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3703 34 453 PRT Gene Family AT5G40870 84.086 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3703 K00876 - gmx:100816209 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3703 4 50787104 50792627 Mtr4g3703 4 50787104 50792627 ECH