Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3683 ATGGCGACGACGGATCCAACGCCGTTAATTGGAAATTCATCGGACGAATCAAACTCTGGACGGAGAGTTCTCCGTGCGCCGAGTCTCCGGCAAGCGGCGCGGTTTCTACGGCAAGCGAGTGGACGGAGGTTGATGCGTGAGCCGTCGATGATGGTGAGAGAAACCGCGGCTGAGCAATTGGAAGAACGGCAAAGTGATTGGGCTTATTCGAAGCCGGTGGTGATTCTTGATATTCTGTGGAATTTCGTGTTTATTATTGCGGCGGTTACTGTGTTGATTTTGAGTCGGAATGAATCGCCGAGTTCACCGCTTAGGTTGTGGATTTTAGGTTATGCGTTGCAGTGTGTTCTTCATGTTGTGTGTGTTTGTTTTGAGTATCGGAGACGGGTGCGGATGCGGGGAGAGGTGAATGGCAATGGTGGTAATGTGGTTGGAGGTGGTGGTAGTGGGGATTTGAGCTTTGATTCGATGGATAGTTCTGGACAGTATGTGAATTTGGCACAGTATGGGGATGATGGTTCTACAAGTATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCTTTTATTTGGTGGGTCATTGGATTCTATTGGGTATCAGCTGATGGTCAAGATTTGATTCATGATTCTCCTAACCTTTACTGGTTATGTATTGTCTTCTTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTATTGCGCTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGCCTTCCATGTATCATTGCGCTTCTGTATGCAGTTGCAGACCAGGAAGGGGCAACAAAAGAAGACATTGAGCAGTTGTCAAAATTCAAATTCCAAAGAAAAAGCAACGAGAAGCTTGCTGATAATACACAAGGACCTGTTGGAGGAATAATGATTGAATGTCAAGCTGATTCCCCAATTGAACACGTGCTTGCCGATGAGGATGCGGAGTGTTGCATCTGCCTTTCTGCCTATGATGACGGGGCTGAACTAAGACAACTTCCTTGTGGTCACCATTTTCACTGTACCTGTGTGGACAAATGGCTGCACATCAATGCTACTTGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAGCCATGGTCAAGAGGAAGTGTAG 1116 0.4615 MATTDPTPLIGNSSDESNSGRRVLRAPSLRQAARFLRQASGRRLMREPSMMVRETAAEQLEERQSDWAYSKPVVILDILWNFVFIIAAVTVLILSRNESPSSPLRLWILGYALQCVLHVVCVCFEYRRRVRMRGEVNGNGGNVVGGGGSGDLSFDSMDSSGQYVNLAQYGDDGSTSMAKHLESANTMFSFIWWVIGFYWVSADGQDLIHDSPNLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFKFQRKSNEKLADNTQGPVGGIMIECQADSPIEHVLADEDAECCICLSAYDDGAELRQLPCGHHFHCTCVDKWLHINATCPLCKYNILKSSSHGQEEV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3683 371 CDD RING-H2_RNF111_like 315 359 - -
Mtr4g3683 371 PANTHER TARGET OF ERK KINASE MPK-1 3 371 - -
Mtr4g3683 371 Pfam Ring finger domain 315 357 IPR001841 -
Mtr4g3683 371 SUPERFAMILY RING/U-box 306 363 - -
Mtr4g3683 371 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g3683 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 370 IPR013083 -
Mtr4g3683 371 SMART ring_2 316 356 IPR001841 -
Mtr4g3683 371 MobiDBLite consensus disorder prediction 1 23 - -
Mtr4g3683 371 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 371 - -
Mtr4g3683 371 ProSiteProfiles Zinc finger RING-type profile. 316 357 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3683 Mtr-Chr4 50594040 50601100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3683 7 366 C3H Transcription Factor Family AT1G68070 47.671 2.58e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3683 - - gmx:100779757 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3683 4 50594040 50601100 Mtr5g0316 5 2934575 2941580 PCT