LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g3681	ATGGGAAAAGCATCAAGGTGGTTTCGTGGCCTTCTTGGTCTCAAAAAAACCGAACATGGTTCTTCTTCTTCTGATCAAAAACCACCTAAGGAGAAACGTAGATGGAGTTTTGTAAAATCATATAGAGAAGAACAACAACATAGCAGCCACGTCACGTTTCCGACAGAACATGTCCAAAACAACAGACAGGCCATCGCCGTGGCCGCTGCCGAGGTTGTCAGATTTAATTACAGCAGTAATGGCATCGTCAGGATACGAGAACAATGGGCTGCTGTTAAGATCCAAGCCGCTTTTCGTGGAAGTTTGGCAAGGAAGGCACTACGAGCATTAAAAGGGCTGGTGAAACTCCAGGCACTGGTGAGAGGTCATATTGAGAGGAAACGAACAGCAGAGTGGCTCAAAAGAATGCAATCACTTTTACGGGCACAGGCACGATTTAATGCAGCACGCACCATGCAAACCTCACATTTGAATGCAAAATCATCTACTCTCCACCTCTATGGTCCAGCAACACCAGAAAAATCTGAAAGCCCTGTTAGATCTAGGAGCATGAAATCTGAGCATTCACCTGGACTCAAGAGAAATGGTTCCAAATCTTGTCTCTCAAACGGCGGCAACATATCAGAAAATCAGTTAGACGAACAATCATGGAATAGAGTAAGATCACTGATAAGAACATATAGCAGGAGTGACGAAAAAAGTGATAGGATTGTCGAAATTGATTCGGGAAAACAACACATCAACACAAAACGCAGAAACATCTTTCACTCCACAAGTGATCCTGATTATTATTATAGTCAGAATTTGACCCCTACAAAGGAATCAAAATCTCATCAATTTGGTCAAAGTGTATCTTGTGAGGTTCAATCTTATTACAACCCACTAAAACTTAACGAAGTTGAAGAGAACTCGTTTTGCACCGCAAACAATAGTCCTCAACTTTTATCATCTGCAACTTCAAAAGATGATGGTTACAACAGAAGTCCTTTTACTCCTACAAGAAGTGATGGCCCAAGAAGCTACATTAGAGGCTACTCTGATTACCCAAGTTACATGGCTTATACAGAGTCGGCAAAGGCCAAAGTTAGATCTCTGAGTGCACCAAAACAAAGGCCTCAATATGAGAAATCAAGTTCGTCAAATAGGTACTCACTAAATGGACACGACATGGCAAGATTGGCCGCACAGAGAACATCTGCATTGCAAGCAAGCTTCACTAGCAAAGGCTATCCTGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTAGGGTATAGATATTGA	1284	0.4237	MGKASRWFRGLLGLKKTEHGSSSSDQKPPKEKRRWSFVKSYREEQQHSSHVTFPTEHVQNNRQAIAVAAAEVVRFNYSSNGIVRIREQWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLKRMQSLLRAQARFNAARTMQTSHLNAKSSTLHLYGPATPEKSESPVRSRSMKSEHSPGLKRNGSKSCLSNGGNISENQLDEQSWNRVRSLIRTYSRSDEKSDRIVEIDSGKQHINTKRRNIFHSTSDPDYYYSQNLTPTKESKSHQFGQSVSCEVQSYYNPLKLNEVEENSFCTANNSPQLLSSATSKDDGYNRSPFTPTRSDGPRSYIRGYSDYPSYMAYTESAKAKVRSLSAPKQRPQYEKSSSSNRYSLNGHDMARLAAQRTSALQASFTSKGYPGSGRLDKLGMPVGYRY*	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	363	385	-	-
	Mtr4g3681	427	SMART	iq_5	109	130	IPR000048	GO:0005515
	Mtr4g3681	427	SMART	iq_5	86	108	IPR000048	GO:0005515
	Mtr4g3681	427	ProSiteProfiles	IQ motif profile.	111	138	IPR000048	GO:0005515
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	259	276	-	-
	Mtr4g3681	427	Pfam	Protein of unknown function (DUF4005)	311	396	IPR025064	-
	Mtr4g3681	427	PANTHER	IQ-DOMAIN 5-RELATED	1	422	-	-
	Mtr4g3681	427	Gene3D	-	86	139	-	-
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	311	335	-	-
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	193	208	-	-
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	370	385	-	-
	Mtr4g3681	427	PANTHER	CALMODULIN BINDING PROTEIN IQD22	1	422	-	-
	Mtr4g3681	427	Pfam	IQ calmodulin-binding motif	114	128	IPR000048	GO:0005515
	Mtr4g3681	427	Pfam	IQ calmodulin-binding motif	89	108	IPR000048	GO:0005515
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	311	342	-	-
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	153	208	-	-
	Mtr4g3681	427	ProSiteProfiles	IQ motif profile.	87	115	IPR000048	GO:0005515
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	178	192	-	-
	Mtr4g3681	427	MobiDBLite	consensus disorder prediction	254	276	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g3681	Mtr-Chr4	50580564	50584059	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g3681	1	45	IQD Protein Family	AT4G23060	50.980	4.27e-07	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g3681	-		-	gmx:100793587	502.286