Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3678 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGGTTAAGGAGTGAAGCATCAGCACAGTTTCAAGCTTGTCATTTTCAGCTACCATCAATGAGCACACAGAGATTGGACTTACCTTGCAGCTTCCCTCGGAAAGATGGTTCTTCGCGTTCGCAGCAGCCATTGAGGCCGGTGGGGATATCAGTGGAGAAGCCTGAAGTCAAGAACAACAGCAGCAGTACTTGTTCTCTGCAGCAGAACATTCGGTTACCGCCTTTAGCAACAACTGCTCAGTCATTGGGAGAAATCAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGCTTGAAGAGGCTTGCAGAACATGGATCTTTGGATGAGTCTTTTGCAAATAGAGCTAAGAGGAAAAAGGGGAATGGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAAAGTTTCAGTTTGGCACAATTTGGAGCTGGAAACTTTTGGTCTGTTCACAGTTTTGGAGGGTTTAATAGCCCTTCACTTCCTTTCTCTTTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGATTTCTGCACCTTTGCCTTTGTCTAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTCGGTGAGGGTAGCCACCAACATCAACACCATCATCATGTCAATGAAGGTTCAGTCTCTAATGGTTCATCGGAGAGTCAGAGTTTGAGCTTGAGGTTGAATGAGAATGCATCAGAACATGAAGAGGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGTACTGAAGTGGAGACAGGAGAAGAGGACGAAGAAGAGGAGCATCGTGGTTTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTCGATGCCATTGGGTCAAGGAATGTGGCTGCAGTCAACCATTTCATTGCAAAATTGGGTGATCTTGCATCTCCAAGAGGAACTTCGATAAGCCGAATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGAGTCACTAGGCTTTGGCCTCATGTTTTTCAAATCAGTGCCACTTCTCGCGATTTTGACAGGGTGGTGGATGATGATGAAACTGTCACTGCATTGAGGCTTCTAAACCAGGTTACCCCAATTCCCAAGTTTCTTCATTTCACATCGAATGAGATGTTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACGTTATTGACTTCGACATAAAGCAAGGACTACAATGGCCTAGCTTCTTCCAAAGTTTAGCATCAAGAACTAATCCTCCAAGCCACGTTCGAATCACAGGCGTGGGGGAATCGAAGCAAGAGCTGAATGAAACTGGAGACAGGCTTGCTGGTTTCGCTGAGGCATTGAACCTTCCCTTTGATTTTCATCCAGTGGTGGACAGGCTTGAAGACGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTTCACAAGACACTTCATGATGGTAGTGGAGGAGCATTGAGAGACTTTTTGGGCCTCATTCGTAGCACCAATCCTACAATTGTTGTTATGGCAGAGCAAGAAGCGGAACACAATGAGGCAAGGTTGGACTCAAGAGTATGCAATTCATTGAAATATTACTCAGCGCTGTTTGATTCGATTGATCACAGTGGCCTTCCATTAGAGAGTCCGATGAGGATCAAGATAGAGGAGATGTTAGCTAGGGAGATAAGGAACATCGTTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTTGGGAATTGGAGAAAGATGATAGTGGAGCATGGAGGGTTCAGATGCATGGGAGTCACTGATAGGGAACTGATTCAGAGCCAGTTTCTGTTGAAAATGTATTCTTGTGATAATTACAGTGTTCAGAAGCAGGAGCAGGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTACACAGTATCTTCTTGGACACCGATTGACGTTGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCTTGA 2034 0.4523 MLAGCSSSTLLSPTHRLRSEASAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQPLRPVGISVEKPEVKNNSSSTCSLQQNIRLPPLATTAQSLGEIKDEEFWEKGGRSLKRLAEHGSLDESFANRAKRKKGNGGDENFDEFERESFSLAQFGAGNFWSVHSFGGFNSPSLPFSLNCSGDEERVCFAPAEVISAPLPLSNNPWLESAVTKITNFGEGSHQHQHHHHVNEGSVSNGSSESQSLSLRLNENASEHEEGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAVNHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFQISATSRDFDRVVDDDETVTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHVIDFDIKQGLQWPSFFQSLASRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFDFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIVVMAEQEAEHNEARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMLAREIRNIVACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDRELIQSQFLLKMYSCDNYSVQKQEQEGATALTLGWLDQPLYTVSSWTPIDVAGSSSSFSQPA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3678 677 Pfam GRAS domain family 290 662 IPR005202 -
Mtr4g3678 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 666 IPR005202 -
Mtr4g3678 677 PANTHER SCARECROW-LIKE PROTEIN 28 6 666 IPR030027 -
Mtr4g3678 677 MobiDBLite consensus disorder prediction 219 284 - -
Mtr4g3678 677 MobiDBLite consensus disorder prediction 232 269 - -
Mtr4g3678 677 MobiDBLite consensus disorder prediction 42 65 - -
Mtr4g3678 677 ProSiteProfiles GRAS family profile. 280 662 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3678 Mtr-Chr4 50550020 50553340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3678 1 662 GRAS Transcription Factor Family AT1G63100 56.115 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g3678 GRAS 2.2e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3678 - - tcc:18606459 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3678 4 50550020 50553340 Mtr4g3678 4 50550020 50553340 ECH