Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3650 ATGCACGCTGAGTGCGGTGGTGCGATAAATATGGCAAAAAAAATCATAGAAGAAGAAATACTGGAAATCAAAGAAGAAATAGAGAACATCGATAGGACAATTGCAATGTACAACAGTCGTATAACCTACTACCAACGTGAGGTCCTAATAGAAAAGAAATGCTTGGAAGACCAACAAGAGACGTTACTTATGGCTCAATCTAATTTGAAATGCTTTGATGGTGGTAGAACGAGCAGTGGAAGAGGAAGTGGTGGTAGAGGTTCTAGTGGTAGAGGTGGAGGTGGAAAGAGTGGTGGTGGTGGATGGAGCGGTGGAAGAAGAAGCAGTGATAGAGGTCGATTCAATAGCCTTATAGGAAGCGATGGTTCTGGTGGTGGAGGTGGAAGGAGTGGTGGTGGTGGATTTGAAGGAGGTGGAAGGCTCCGTGGATTTGGTGGTCGAGGAATGGGCTTAGTGGTCCAGCCATTCATTGGCTATTACATCGACCACTGCCAATCGAGTTTCGACCGCCATCGCCCGTTCATTTTAGGAGGTGTCATTGCAGTCGTTATTGCTGCCTTGCTCATTGCGTTTGCATCTGATCTAGGCCATTTGTTTGGTGACACCCTGGAGTCAGAAACAAAGCCACATAATATTGTCATTACTGTCTTGAGCTTATCCATGTTCGAAGTTGCAAATAATGTAGTCCAAACACCTTGTCGAGCCTTCATTGGTGACCTCGCCTCTGACGATTACAACCAAGTGATAATAGGCAACTGGTTGGTTTCTTTTTTCAAGTTTGCTCAGTTACTTGGTGAATTCAATGGCCTACCACAATCCATGTGGATGCTAATGTTGATAACGGGGATCAGTTGGGTTGCATGGTTCCTATTTTCTTTATTCAACACTGATTGGATGGGCCGTGAAGGATGGAAAGCGATTCGTGACTTTTACGGAATCGATCTTGGTGCCTGGATTACCTTGGTTTTTGTTGGTGACGGACAGTTTGATATACAGTTGACTGATAGGTTTCACAAGAGTATCCCCTACCCGGTTTTTGATCCCCTTATGCATTTCCTTCTTGACAAGATGAATTTGCAAGCAACTTTCGATGAATATCTCCCCCCAATAACATCTCTTCTCGCTTATCGTCACAATATCACTGACATGATTCTACTTTACACCGGCAATGTTCCGCAGATGCTTGATACCTCAAGACAACTGTGA 1206 0.4436 MHAECGGAINMAKKIIEEEILEIKEEIENIDRTIAMYNSRITYYQREVLIEKKCLEDQQETLLMAQSNLKCFDGGRTSSGRGSGGRGSSGRGGGGKSGGGGWSGGRRSSDRGRFNSLIGSDGSGGGGGRSGGGGFEGGGRLRGFGGRGMGLVVQPFIGYYIDHCQSSFDRHRPFILGGVIAVVIAALLIAFASDLGHLFGDTLESETKPHNIVITVLSLSMFEVANNVVQTPCRAFIGDLASDDYNQVIIGNWLVSFFKFAQLLGEFNGLPQSMWMLMLITGISWVAWFLFSLFNTDWMGREGWKAIRDFYGIDLGAWITLVFVGDGQFDIQLTDRFHKSIPYPVFDPLMHFLLDKMNLQATFDEYLPPITSLLAYRHNITDMILLYTGNVPQMLDTSRQL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3650 401 MobiDBLite consensus disorder prediction 74 132 - -
Mtr4g3650 401 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 149 302 - -
Mtr4g3650 401 PANTHER SUGAR TRANSPORTER 149 302 - -
Mtr4g3650 401 Coils Coil 13 40 - -
Mtr4g3650 401 SUPERFAMILY MFS general substrate transporter 149 292 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3650 Mtr-Chr4 50285836 50294451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3650 256 302 Sucrose Transporter Gene Family AT1G71890 46.809 1.25e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3650 K15378 - mtr:MTR_4g102190 292.352