Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3637 ATGGAAGCTAGTGGCGGTGTTAGTGGTGGCGTAACGGTGGTCGGATCAGATGCTCCGTCGGAGTATCACGTAGCTCCGAGAACAGACAACCAAACTCCGACCACTGGATCAGCTGTTCAGCTTTTAGCGGCGGTTCAAGCTGGTGCTCCTCCGCAACAACCGCCGTATACGGCGGTGTTAACGGCAGCTCCGGCAGTAACGACGGTGCCAGAGAAGAAGAAGAGAGGAAGACCGAGAAAGTATGCAGCGGATGGTTCGGTGACGGCAGCGTTGTCTCCGAAACCGATATCATCGTCGGCTCCGTTGCCGCCGGTGATCGATTTCACGGCGGAGAAGCGTGCAAAAGTGAAGCCAGTTAGTTCTGTGAGCAAAGCGAATTTTGAGTTGGAAAATATAGAGGGAGCCAAAGAGACATCTAGAACCAGAAGCAACACAATGTCAGAAGCAATTTCCAATTCCAACTCTACAATTTTAAGTGAATGGGTCCCTTGCTCTGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGATGTTACCATGAAGGTAATTTCATTTTCTCAGCAAGGACCTCGAGCTGTATGCATTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGACTGTTTGAAATTCTGTCTTTATCTGGTTCCTTCATGCCAAATGAAAGTGGAGGAGGAACACGAAGCAGATCAGGCGGCATGAGTGTGTCTTTGGCAAGTCCTGACGGACGTGTTGTTGGCGGAGGAGTAGCTGGTCTGTTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCCAAGAAATCAGAAACATGATGTGGTATCAACTGTGTCATCTCCTGCTGTTGTTCCCATTCCTACTCTTGATCCAATACCTATTCTATCATCAGTAACTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCCAGCATCGGATGCAAAGGATAAGCCCGCTACTGATATTAATGTGTCTCTTCCTGGAGGCTAA 1077 0.4856 MEASGGVSGGVTVVGSDAPSEYHVAPRTDNQTPTTGSAVQLLAAVQAGAPPQQPPYTAVLTAAPAVTTVPEKKKRGRPRKYAADGSVTAALSPKPISSSAPLPPVIDFTAEKRAKVKPVSSVSKANFELENIEGAKETSRTRSNTMSEAISNSNSTILSEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKPRNQKHDVVSTVSSPAVVPIPTLDPIPILSSVTSFRGDNWSAVPASDAKDKPATDINVSLPGG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3637 358 ProSiteProfiles PPC domain profile profile. 167 313 IPR005175 -
Mtr4g3637 358 MobiDBLite consensus disorder prediction 1 35 - -
Mtr4g3637 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 172 286 IPR005175 -
Mtr4g3637 358 CDD DUF296 171 263 IPR005175 -
Mtr4g3637 358 Gene3D - 172 304 - -
Mtr4g3637 358 MobiDBLite consensus disorder prediction 336 358 - -
Mtr4g3637 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 356 - -
Mtr4g3637 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 168 290 - -
Mtr4g3637 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 356 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3637 Mtr-Chr4 50150292 50155384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3637 1 355 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.759 2.03e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3637 - - gmx:100801730 457.218