Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3626 ATGAAAGGAAGATTACTCAAGCTTTCTTTGATGGTCCTGATGAACCTTGTTCTTTACATGGCTAGCACTGCTGAATCAACAATCACAAAAGGATCCAACCAAAATTCAATAAACTTTATCAAATCCTCGTGTAGAGCCACTCGTTACCCTGATGTATGTGTTCAAACTCTCTTGGGCTATGCAAACATGATTAACGAAAACGAGCAAAAACTAGCCATCGTTGCCTTGACAGTAAGCATATCAAGGACTCAATCAAGTGCATCATTCATGAAGAAATTTTCCAAGGTAAAAGGGATTAAGCCAAGGGAATATAGTGCTGTGCAAGATTGCAAAGCAAACATGGATAGTAGCGTGGACCGTCTTAACAAATCGGTTAAGGAGCTAGGACTTTTGGGTAAGGCTAAGGGAGAGGATTTGGTTTGGCATATAAATAATGTTCAAACTTGGGTTAGTGCTGCTCTTACTGATCAGAACACTTGTGTTGACAACTTTTCTAGTCCTCATATGGATCAAAATTTGAAGGCTGCAATTGGTGCTAAGGAACTGTAA 549 0.3953 MKGRLLKLSLMVLMNLVLYMASTAESTITKGSNQNSINFIKSSCRATRYPDVCVQTLLGYANMINENEQKLAIVALTVSISRTQSSASFMKKFSKVKGIKPREYSAVQDCKANMDSSVDRLNKSVKELGLLGKAKGEDLVWHINNVQTWVSAALTDQNTCVDNFSSPHMDQNLKAAIGAKEL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3626 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 179 IPR035513 -
Mtr4g3626 182 Pfam Plant invertase/pectin methylesterase inhibitor 38 170 IPR006501 GO:0004857
Mtr4g3626 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 167 IPR035513 -
Mtr4g3626 182 CDD PMEI-like_3 42 180 - -
Mtr4g3626 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 178 - -
Mtr4g3626 182 SMART PMEI_2 35 176 IPR006501 GO:0004857
Mtr4g3626 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 168 IPR006501 GO:0004857
Mtr4g3626 182 PANTHER PECTINESTERASE INHIBITOR 9 17 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3626 Mtr-Chr4 50039386 50044410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3626 40 177 Carbohydrate Esterase AT3G14310 29.496 3.01e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3626 - - lja:Lj0g3v0042549.1 202.601