Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3623 ATGTTTCATAAGGTTTTAATTCTTCTGAGGTGGAATATGAATACATTTTCACATGTACCTCCAGGCTTTCGTTTTCATCCAACCGACGAAGAACTTGTTGATTACTACCTCAGGAAGAAGGTATCGTCTAAAAAGATTGATCTCGATGTCATCAAAGACGTTGATCTCTATAAAATTGAACCATGGGATCTTCAAGAATTATGCAAAATAGGAAGTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCAACAGGAACTCGAACGAATAGAGCAACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGATAAGGCAATATACTCAAAACAATTTCTGGTTGGGATGAGAAAGACTCTAGTGTTTTACAAAGGACGTGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTACCGTCTTGAAACTAATCAAAATGGAATTTCTCAGGAAGAAGGATGGGTTGTATGCAGAGTATTCAAGAAGAGAATGACAACAGTGCAAAAAATGAATGAGTATGATCAATCACCATGTAACTGGTATGATGATCAAGTTTCCTTCATGCCAGATCTTGAATCTCCAACCCGAACCAATTCTCACCCTCCTAACTATACTTCATATCACTCATGCAAACCAGAACTAGAATTAATTCAATATAACACACCCCACCAATACCATGATGCTAATTTTCTCCAACTTCCACACCTTGAAAGTCCAAAAATTACTCAATCTATTATCCCTTATAATCATCATGCTCATGCAAACAATAACAATATTGCACTTACTCAACAGATGCAATATTTGCAGTACCATCAACAAAATCTTCACTCACTTTATGGTGGTAACAGCAGTACTGGCAATGATGAACAAGTTACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCTCAGCTAAGTCATGAAGATAATGATAATAATAATAATAATCAAGATCATGTTTCTAATAAAGAAACTAGTTCTTTCTCCAATGCAGCTATTCTTCATGTGGCTGAACAAATTACTCTTCTTGATAATGGATCCAAAAAGAATGAAGTTTCTGAGGAACATGCTTCAACTTCTACCTCCAGTTGCCACATGGAACTTTGGAAGTGA 1131 0.3643 MFHKVLILLRWNMNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGISQEEGWVVCRVFKKRMTTVQKMNEYDQSPCNWYDDQVSFMPDLESPTRTNSHPPNYTSYHSCKPELELIQYNTPHQYHDANFLQLPHLESPKITQSIIPYNHHAHANNNNIALTQQMQYLQYHQQNLHSLYGGNSSTGNDEQVTDWRVLDKFVASQLSHEDNDNNNNNQDHVSNKETSSFSNAAILHVAEQITLLDNGSKKNEVSEEHASTSTSSCHMELWK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3623 376 MobiDBLite consensus disorder prediction 362 376 - -
Mtr4g3623 376 ProSiteProfiles NAC domain profile. 19 168 IPR003441 GO:0003677|GO:0006355
Mtr4g3623 376 SUPERFAMILY NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Mtr4g3623 376 Pfam No apical meristem (NAM) protein 20 147 IPR003441 GO:0003677|GO:0006355
Mtr4g3623 376 Gene3D NAC domain 28 172 IPR036093 GO:0003677|GO:0006355
Mtr4g3623 376 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 339 - -
Mtr4g3623 376 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 16 339 - -
Mtr4g3623 376 MobiDBLite consensus disorder prediction 353 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3623 Mtr-Chr4 49992724 49998952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3623 13 376 NAC Transcription Factor Family AT1G12260 55.827 1.01e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g3623 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3623 - - gmx:100783529 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3623 4 49992724 49998952 Mtr4g3623 4 49992724 49998952 ECH
Mtr5g0396 5 3589359 3593832 Mtr4g3623 4 49992724 49998952 PCT