Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3618 ATGGATTTGCAGCCTTCTCATGCTTCTCCAATTCTTACTGATCCTGTCAGCAAGTCAAGGCTTGGAATCCATTCTAGTTTGTTAGCTTATTCCCAACAAGATTCACCGCTATCTCCCGGGAAGTATACAAAATCCAATTCAAAGAAAAATATGGGAAGTCTCGATGATGTTAGGTCTAATGGTTGGTTGGATGCTATGAAGGCATCTTCGCCTCCAAGGAAGAAATCGGTACTCAAAGGTTCGAGCGCTCTGGTTGCTTCAATTGACTTTGACATGGAAGATTATAATTTATGGATGCTGGAATATCCTTCAGCACTAGGCGCTTTTGAGAAAATCATCGACCATGCAAAGAATAAGAAGATTGCAATGTTTCTCGATTATGATGGCACACTTTCACCTATAGTAGAGGATCCAGATTGCGCTTTTATGACTGAACCTATGCGAACAACGGTGAGAAGAGTGGCAAAGTGTTTCCCTACGGCAATCATTAGTGGAAGAAGTCGCGACAAGGTTTTCGATTTAGTTAAACTAACAGAACTCTACTATGCCGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGACACTTTGCATGAAAACCATCCAGATTGTGTCAAGTCTACTGATGATCAGGGAAATGAGATTACTCTCTTTCAACCAGCGAAAGAATTCCTTCCTATGATTGATGAGGTTTTTAGAACCCTCATCGATATTACCAAAGACATCGAAGGCGCAAAAGTTGAGAATCACAAGTTTTGCGTTTCTGTACATTACCGTAATGTAGAAGAGAATAATTGGACAGTGATTGCTCAACGTGTCCATGATATTTTGAAAAATTACCCTCGTTTACGTTCAACTCATGGAAGGAAGGTTTTAGAAATCCGTCCTGTAATTGACTGGAACAAGGGAAAAGCTGTTGAATTTTTACTTGAATCTCTCGGGTTAACCGATATGAATGATGTGCTTCCTATCTACATTGGAGATGATAAAACAGATGAAGACGCATTCAAGGTGCTGCGGGAGAGCAATCGAGGTTGTGGAATATTGGTTTCATCAGTGAGAAAAGATAGCAATGCTTTATACTCTCTCCGAGACACCTCTGAGGTTATGAGATTTCTCCAACGTTTGGTGAATTGGAAGAGGAAGCAAGAAAGAAAGCATGGGAAGAAATGA 1176 0.4073 MDLQPSHASPILTDPVSKSRLGIHSSLLAYSQQDSPLSPGKYTKSNSKKNMGSLDDVRSNGWLDAMKASSPPRKKSVLKGSSALVASIDFDMEDYNLWMLEYPSALGAFEKIIDHAKNKKIAMFLDYDGTLSPIVEDPDCAFMTEPMRTTVRRVAKCFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSDTLHENHPDCVKSTDDQGNEITLFQPAKEFLPMIDEVFRTLIDITKDIEGAKVENHKFCVSVHYRNVEENNWTVIAQRVHDILKNYPRLRSTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDMNDVLPIYIGDDKTDEDAFKVLRESNRGCGILVSSVRKDSNALYSLRDTSEVMRFLQRLVNWKRKQERKHGKK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3618 391 Pfam Trehalose-phosphatase 124 368 IPR003337 GO:0003824|GO:0005992
Mtr4g3618 391 MobiDBLite consensus disorder prediction 32 54 - -
Mtr4g3618 391 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 387 IPR044651 GO:0004805|GO:0005992
Mtr4g3618 391 TIGRFAM T6PP: trehalose-phosphatase 119 378 IPR003337 GO:0003824|GO:0005992
Mtr4g3618 391 CDD HAD_TPP 122 372 - -
Mtr4g3618 391 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 387 - -
Mtr4g3618 391 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 123 341 IPR006379 -
Mtr4g3618 391 Gene3D - 121 209 IPR023214 -
Mtr4g3618 391 Gene3D - 226 391 IPR023214 -
Mtr4g3618 391 SUPERFAMILY HAD-like 122 382 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3618 Mtr-Chr4 49922613 49929033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3618 115 377 Trehalose Biosynthesis Gene Families AT1G70290 25.614 4.81e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3618 K01087 - zju:107430298 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3618 4 49922613 49929033 Mtr4g3618 4 49922613 49929033 ECH