Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3591 ATGAGTTCAAGCTCCTCACAGCGCATGTTCCAGCTCAAGTTCGATCCTTTAACCGGTAACTCCGAATGGGTCATCATCGACGAAGACGACGACGACGAACAAACCTTCCAGTTCCACCAACCCCTTCTCGCCACAACATCATACCTAGACATGCTCAACGATTCCACCAGAAACACTGCATTTCGTGAAGCCATTGAGAAAACCATCACAGAACCTTGTCACGTTCTCGATATCGGTGCTGGAACTGGGTTGCTTTCTATGATGGCTTCACGAGCTATGGGTGGGAAAGGAACGGTGACGGCGTGTGAGTCTTATCTTCCTATGGTGAAGTTGATGAAGAAGGTTATGCGGATTAATGGGTTGGAAGGAAGAATTAAAGTTATTAATAAGCGTTCTGATGAACTTGAAGTTGGTGTTGATTTATCTTCATGTGCTGATGTTCTTGTGAGCGAGATATTAGATTCAGAATTATTGGGTGAGGGGCTTATACCAACCCTACAACATGCACATGACAATTTGTTGGTGGAAAACCCTCTTACTGTACCTTATCGAGCAACTACTTACGGACAGCTAGTTGAAAGCACATTTTTATGGCGATTACATGATTTGCATAGTAATGAGGCTGGTGCATCTGATGGCATTCGACTTACCCCTCCTGGACTTGAAAGTGTTTTAAGTGTTAAACGTCAGCAATATGCCATGCATGTTGATCCAATAGGAGAAGAACTGAAACCGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGTTGTGCATAAATGCAACCGATGATGGCAGAGTTCATGCTGTTGTCTCCTGGTGGGTACTTCAACTTGATCGTGAAGGAACAATTTATTATTCCACTGCTCCTAGGTGGATAAGATCACCAACAACTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGAAGTGGTATATCCGTATCTAAAGGGGAAGAAATTCATTTACATGCTACTCATAATGATACCAGTATCTCGTATAATCTAGATACCCAAGTGTCAACAAATGAGGATTTGCATCGTGGTTTAACAACCGGAGATTTTCAGCTTGTACTTCCACCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGCTTTCGATGTTGAAAGCAGTAGAAAGTGTGTTGCAGGGAAGACGTCCCTCATTATGCTTGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTAGCAAAGATTTCAGAAGCATCACATGTAATATCATCTTTTCCCAGGCTGAAGGAAAATGGCCTACGATATTTGCAAGCCGCTGCCTGTGCAAATAATATTTCACCTAATTCCATAGAAGTTGTTGGAAAAGGGGTGAAAAAGTTAACCATGCATGATACAAACCAGAAAAAGGTTGACCTCTTAATAGCAGAACCTTTCTATTTTGGACATGATAGCATGCTTCCATGGCAGAACCTGCGGTTTTGGAAGGATCGTACAACACTCGATTATATCCTCTCGGAAGATGCTATAATAATTCCGAGTAAAGGAATTTTGAGGGCTTGTGCCATCCATCTTCCTGATCTTTGGAAAAGTCGCTGCTGCTTGAATAAGATAGAAGGTTTTGACCATTCTGGTGTAAACGCTACATTGGGAGCTTGTGGTCATCTACCTAAATCGGAAGAGGGTCCTTGTCTGCCGTTTTTCCCTTGGCAGTCTGGAGAATTTGATGTGCTTAGTGAGACTTTTGATGTGATGGAGTTTGATTTCACAAAACAAATATGCAAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAAACCGGAGTATGCCATGGGTTTGTGCTTTGGATTGACTGGGTGATGGATTTGCAAAATTCTGTTGTTATATCAACTGGTCCAGATAAAAGATATTGGAAGCAGGGGATAAAGCTTCTTGCAACACCAAGAACTGTAGGACCCCAAGTATCTACAAGTGTTCAAGGATGTTGCTCTGCAGCAGCACTTGAAGCATTTTTTAATCCATCAAATGGGGAACTCAAAATCATACTTGATTTCTTATGA 2094 0.4193 MSSSSSQRMFQLKFDPLTGNSEWVIIDEDDDDEQTFQFHQPLLATTSYLDMLNDSTRNTAFREAIEKTITEPCHVLDIGAGTGLLSMMASRAMGGKGTVTACESYLPMVKLMKKVMRINGLEGRIKVINKRSDELEVGVDLSSCADVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLWRLHDLHSNEAGASDGIRLTPPGLESVLSVKRQQYAMHVDPIGEELKPLSEPFKIFEFDFWKRPESYGETELCINATDDGRVHAVVSWWVLQLDREGTIYYSTAPRWIRSPTTTSPVDWCDHWKQCVWFVPGSGISVSKGEEIHLHATHNDTSISYNLDTQVSTNEDLHRGLTTGDFQLVLPPERAAIYGDKGWRLSMLKAVESVLQGRRPSLCLVADDSVFLPLLVAKISEASHVISSFPRLKENGLRYLQAAACANNISPNSIEVVGKGVKKLTMHDTNQKKVDLLIAEPFYFGHDSMLPWQNLRFWKDRTTLDYILSEDAIIIPSKGILRACAIHLPDLWKSRCCLNKIEGFDHSGVNATLGACGHLPKSEEGPCLPFFPWQSGEFDVLSETFDVMEFDFTKQICKCQGKSQVKFTKTGVCHGFVLWIDWVMDLQNSVVISTGPDKRYWKQGIKLLATPRTVGPQVSTSVQGCCSAAALEAFFNPSNGELKIILDFL* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3591 697 Gene3D Vaccinia Virus protein VP39 375 524 IPR029063 -
Mtr4g3591 697 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 9 636 IPR025799 GO:0016274|GO:0018216
Mtr4g3591 697 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 351 IPR029063 -
Mtr4g3591 697 Gene3D - 528 696 - -
Mtr4g3591 697 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 32 356 IPR025799 GO:0016274|GO:0018216
Mtr4g3591 697 PIRSF Arg_N-mtase 7 696 IPR014644 GO:0006479|GO:0008168
Mtr4g3591 697 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 663 IPR029063 -
Mtr4g3591 697 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 362 697 IPR025799 GO:0016274|GO:0018216
Mtr4g3591 697 Pfam Ribosomal protein L11 methyltransferase (PrmA) 63 155 - -
Mtr4g3591 697 Gene3D - 184 368 - -
Mtr4g3591 697 Gene3D Vaccinia Virus protein VP39 41 183 IPR029063 -
Mtr4g3591 697 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 9 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3591 Mtr-Chr4 49639793 49646106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3591 48 188 C2H2 Transcription Factor Family AT3G12270 30.667 3.44e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3591 K11438 - gmx:100785846 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3591 4 49639793 49646106 Mtr4g3591 4 49639793 49646106 ECH