Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3585 ATGGGTAAAGTTCACGGTTCCCTTGCTCGTGCTGGAAAAGTTAGAGGACAAACCCCAAAAGTTGCAAAGCAAGACAAGAAGAAGCAGCCACGTGGACGTGCTCACAAGCGTATGCAATACAATCGCCGTTTCGTCACCGCCGTGGTTGGATTCGGAAAGAAGCGTGGACCTAACTCATCTGAGAAGTGA 189 0.4974 MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3585 62 MobiDBLite consensus disorder prediction 1 40 - -
Mtr4g3585 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Mtr4g3585 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Mtr4g3585 62 PANTHER 40S RIBOSOMAL PROTEIN S30 1 62 - -
Mtr4g3585 62 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3585 Mtr-Chr4 49598519 49599311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3585 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.161 1.13e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3585 K02983 - han:110893773 127.102