Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3582 ATGGTGGGGATGATGAATTCAAGAATGATGGAAGATGTGGTTGTAATTGGCGGGTTGATTGGTGTACAATTTGTTTATGCTGGAAATGCTATGCTCTTGAAGTATCTTATGTCTTTAGGTCTCCAATCTTTTACCATTGTCATTTACACTTCTTTTGCTACATTTCTTCTTCTCCTACCCTTTGTCTTGTATTTTGAAAGGAGTAAATGGCCTAAGAAGTTCACTTTCAAGTTGATTGTTCAATTTTTGCTCCTTGCTTTTGGAGGTGTAACTCTGTTCCAATCTTTATTCCTGAAAGGAATCAATCTAACATCAGCAGCAATGGGAACAGCCATGCCAAACCTTGCCCCAGGATTTATCTTCATCATCGCGTGGCTTTTTCGGTTGGAAAAAGTGGACTTAAGTTGCACATATAGTAGAGTAAAAATTATGGGCACATTGCTTTGTGTCTTAGGGGCTTTCACAATGAGCTTAATGCAAAGTATCTCAACTCCTCTACCAATTGAAGAGTTAACAGTTGAATTAACAACTCCATCACCACCATTTGTAATGTTTGACAGAAACAAGATAATTGGTTGCCTCTATCTCTTAGTTTCAATCCTTGTTCTGTCAGGCACCGTTGTTCTACAGGCTTTTACACTAGGAGAATTTCCTGCACCAATGTCTGTGTGTGCAATAACATCAATTTTTGGAGGATTCATCACTTCAGCTGCTCAATTAATTGAATTTCATGAAATCAAAACTGGTTGGCCACTAGTTAGTGTTGGTGACATGATTGGCTATTCTATTCTGTCAGGTGCAGTGACTGGAATATCCCTAAGCTTTAGTGGTTGGGCACTTGAGAAAAGAGGACCAGTGTTGGTATCCATGTTCAGCCCTGTTGGCACAGTTTGCTCAATCATTTTCTCTATTGTTACTCAAGGAGACAGTACCGTTAATATTGGAAGCATAGCGGGTATGTTCCTCATGTTCACAGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGATGGCTTAGAGAGTACAAAACAGGTGGAACTCAAGGAAAAGAATTTTGTTGCATAG 1068 0.397 MVGMMNSRMMEDVVVIGGLIGVQFVYAGNAMLLKYLMSLGLQSFTIVIYTSFATFLLLLPFVLYFERSKWPKKFTFKLIVQFLLLAFGGVTLFQSLFLKGINLTSAAMGTAMPNLAPGFIFIIAWLFRLEKVDLSCTYSRVKIMGTLLCVLGAFTMSLMQSISTPLPIEELTVELTTPSPPFVMFDRNKIIGCLYLLVSILVLSGTVVLQAFTLGEFPAPMSVCAITSIFGGFITSAAQLIEFHEIKTGWPLVSVGDMIGYSILSGAVTGISLSFSGWALEKRGPVLVSMFSPVGTVCSIIFSIVTQGDSTVNIGSIAGMFLMFTGLYFVLWAKGKEDGLESTKQVELKEKNFVA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3582 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 158 - -
Mtr4g3582 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 336 - -
Mtr4g3582 355 Pfam EamA-like transporter family 20 157 IPR000620 GO:0016020|GO:0016021
Mtr4g3582 355 PANTHER WAT1-RELATED PROTEIN 12 347 IPR030184 GO:0016021|GO:0022857
Mtr4g3582 355 PANTHER OS11G0588100 PROTEIN 12 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3582 Mtr-Chr4 49555570 49559715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3582 5 337 Nodulin-like Gene Family AT5G47470 55.689 5.06e-130 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0423 5 3860337 3862354 Mtr4g3582 4 49555570 49559715 PCT