Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3523 ATGAAGTGTTTTTTCTTCAAAGAGAAATCCAAATCAGCTCCAGAATTGCAGAACAAGAACAAGAACAAGAGTCCGGCGTCGAAACGGGCAACAAACTCTACTGGCTCTATATCTTCTCCTAGAAGTGTGAAGGATTTGTATAGAGAGAAAGAACAAAGCTTCAGAGTTTTCACTTTTCAAGAACTTAGAGATGCTACCAATGGTTTTAATAGGATGCTTAAGATTGGAGAAGGGGGTTTTGGAAGTGTTTATAAAGGATCCATTAAGCCCCCAGATGGACAAGGTGATCCAGTTATAGTTGCCATCAAAAGGCTCAACACTCGTGGATTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTAATCATCCAAATTTGGTTAAGCTTTTGGGATATTGCTCAGTAGATGGAGAAAGAGGAATCCAACGGCTGTTGGTGTATGAGTTCATGCCGAACAGGAGCTTGGAAAATCACCTTTTCAGTAGAACTCTACCTGTCCTTCCATGGAAAACAAGATTGGAAATCATGCTTGGTGCTGCTGAAGGATTAGCTTATTTACACGAGGGATTGGAGATACAGGTGATCTACCGAGATTTCAAATCTTCAAACGTTCTATTGGATGAGGATTTCCACCCGAAGCTATCTGATTTTGGTCTTGCCAGGGAAGGACCACAAGGGGATCAGACTCATGTATCTACTGCGGTTGTTGGAACACAAGGATATGCTGCGCCAGAGTACATCGAAACAGGTCATCTCAAAGTCCAAAGTGACATGTGGAGTTTCGGTGTCGTACTCTACGAAATTCTCACGGGAAGACGATCATTGGAAAGGAACCGTCCGACAACTGAACAAAAGCTATTAGATTGGGTTAAACAATATCCTGCTGACACTAGCAGATTCAGCATGATAATGGACCCGCGTCTCAGGAACCAATATCCGATTGTTGCAGCTCGCAAAATTGCGAAATTGGCCGACAGTTGCTTAAAGAAGAATGCAGAAGATAGACCATCTATGAGTCAGATAGTGGAAGGGTTGAAGCAAGCATTGCAATTTTCAGAAATGTCAAACACTCCTCATGATAATGCTGAATCATCTCGGTCAAGATTGGTTCAAAAAGGTAAATAG 1140 0.4202 MKCFFFKEKSKSAPELQNKNKNKSPASKRATNSTGSISSPRSVKDLYREKEQSFRVFTFQELRDATNGFNRMLKIGEGGFGSVYKGSIKPPDGQGDPVIVAIKRLNTRGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLENHLFSRTLPVLPWKTRLEIMLGAAEGLAYLHEGLEIQVIYRDFKSSNVLLDEDFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTTEQKLLDWVKQYPADTSRFSMIMDPRLRNQYPIVAARKIAKLADSCLKKNAEDRPSMSQIVEGLKQALQFSEMSNTPHDNAESSRSRLVQKGK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3523 379 MobiDBLite consensus disorder prediction 1 42 - -
Mtr4g3523 379 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3523 379 MobiDBLite consensus disorder prediction 17 41 - -
Mtr4g3523 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Mtr4g3523 379 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Mtr4g3523 379 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Mtr4g3523 379 PANTHER OS01G0588500 PROTEIN-RELATED 15 376 - -
Mtr4g3523 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mtr4g3523 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 15 376 - -
Mtr4g3523 379 ProSitePatterns Protein kinases ATP-binding region signature. 75 103 IPR017441 GO:0005524
Mtr4g3523 379 MobiDBLite consensus disorder prediction 1 16 - -
Mtr4g3523 379 MobiDBLite consensus disorder prediction 355 369 - -
Mtr4g3523 379 MobiDBLite consensus disorder prediction 355 379 - -
Mtr4g3523 379 CDD STKc_IRAK 75 352 - -
Mtr4g3523 379 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3523 Mtr-Chr4 48979056 48982742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3523 3 350 Glycoside Hydrolase AT3G07070 43.855 2.06e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g3523 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3523 - K00924 gmx:100305403 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3523 4 48979056 48982742 Mtr4g3523 4 48979056 48982742 ECH
Mtr5g0476 5 4364590 4367487 Mtr4g3523 4 48979056 48982742 PCT