Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3497 ATGGGAGCTGGAGTTTCCAGGTTGTGTTCTTGTTTCGAACCGGTTCAACACCGGAACAAAAAAACCGAGAACCAAGACGTTACTATTTTCACTGATGAACCGTTAGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCGGCCAGGTTTCTTTCTCCGACTCACTCCGATCGCTTTCTCTCACCGGAATCTACTTCTCTTCGGTTTTCACCAACTCATGAATCGGTTCTTAGAACCCGACCCGATTTTCGTGAAACTGCTTTTAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCGAAAGCGGTTATTCAGTTGGAAGAAGAATCTTCCGCCACCGTCGGAGGAGGTTGTGGTGGCGATTTTGTCACCGGTAAGGGTAATATTGTAAATGGCTTTGAAAGTACGTCGTCGTTTAGTGCACTTCCGCTTCAACCTGTTCCGAGAGGTGGTGAGGTTTATGAAGGGAGTGGTTATTTTCTCTCTGGTCCGATTGAGAGTGCGCACTCCGGGCCGATTAACGCCGGCGCCGGTGGGGATTCCGGTGGTGTAGGCGGCGGGAGAGATGTTCCATTCTCGGCGCCGTTAGGGGGGATGTATGGAAGGAAGAAAGGTGTGTCGGGGTTTAGGAAGGCATTTCAACGGAAGGTGTCGTCGGAGAAGAAGCGGCCTTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAGGAGGTTCCGGCAAAAGAGAAGGCAGTGGAGGTGAAAAATGAGACTAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAGGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTATGACGGTTTTAATGGACCGGATGCGCCGGAGTTTTTGATGGGGCATATGTACCGTAATGTTCATAATGAGCTTCAGGGTTTGTTTTGGGAACTTGATGAACCAATGGAGAGTCATAACCCTGTTGAGGTGGAAAAGGAGGGAGAAAATTCAGGTTCTGGTTTGGTGAATATGGTACAACAGACTGAAATTGGACCGGCTGTGGGAACGGAGAGTAAACGGCGTAGGTTGTGGGAATTTTTGGCGGAAGATCCTGAAGATGGACTTGATCTTTCTGGGTCGGATAGGTTTGCGTTTTCAGTTGACGATGCACTCAGTGTTACCAATGCCAATGCAGGTTCGGCAGGTAGTAGACGGTGGCTGTTGCTGTCCAGACTGAAGAACGGTTTGTCAAAGCATAAGGAGGGTGATGGTTTGCCAAAACATAAGGAGGGCAATGGTAGGAAGTTGTTACCGTGGAATTTGGGGAATCAGGAAGAGAAAGAAGAAAAGTCTGAGGTGGAAAACAAACCCTCTGCTTCTGACACTGGTAGTGGTGGTGGGAGGAGGCAGAAATTGGGTCCGGTGGATCATGATTTGGTTTTGAATGCAATGTCGCGGGCGCTTGAAGCGACAGAACTTGCGTATTTGGATATGACGGAAAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCATGTCTGTTGGTTGTTTTGATGAGGGATGAGGATGTGTATGTTATGAATGTTGGGGATAGTCGTGCAATTGTAGCACATTATGAGCCCAAGGAGGATCAGGGTACTTCCAATGTGGAATCTGCAAGCAAGGGAGATGTTCGTGTTGGTTCCAGCAGTGAGAGCATAGTTGAAGAGTCCTTTGCTTTAGATGGAACTCAAACTGAAACCACAATCAAGGTCGGCAATGAGGGTTCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTAAAGAAGAAATCATTAGAATTAAAAATGAGCATCCTGATGATCCCCGTTGCATAGTCAACGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATCTTTGAAACGGCCGAAGTTGAATGATGCCGTACTGGAAATGTTTCGTAATGAATTTATTGGAACTGCCCCATACATATCCTGCTTCCCTTCAGTACGTCACCATAGATTATGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGACGGAGATCCTGCCCAACATTTAATTGAAGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCCCTTGAAGGAAGAATCTGGAAATCGTCAGGGAAATATCTGTGA 2340 0.4688 MGAGVSRLCSCFEPVQHRNKKTENQDVTIFTDEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPESTSLRFSPTHESVLRTRPDFRETAFKAISGASVSANSSVPKAVIQLEEESSATVGGGCGGDFVTGKGNIVNGFESTSSFSALPLQPVPRGGEVYEGSGYFLSGPIESAHSGPINAGAGGDSGGVGGGRDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSSEKKRPWVVPVLNFVGRKEVPAKEKAVEVKNETNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRNVHNELQGLFWELDEPMESHNPVEVEKEGENSGSGLVNMVQQTEIGPAVGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVTNANAGSAGSRRWLLLSRLKNGLSKHKEGDGLPKHKEGNGRKLLPWNLGNQEEKEEKSEVENKPSASDTGSGGGRRQKLGPVDHDLVLNAMSRALEATELAYLDMTEKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEDQGTSNVESASKGDVRVGSSSESIVEESFALDGTQTETTIKVGNEGSAQEMRLAALQLSTDHSTSIKEEIIRIKNEHPDDPRCIVNDRVKGRLKVTRAFGAGSLKRPKLNDAVLEMFRNEFIGTAPYISCFPSVRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3497 779 Pfam Protein phosphatase 2C 600 735 IPR001932 -
Mtr4g3497 779 SUPERFAMILY PP2C-like 264 768 IPR036457 -
Mtr4g3497 779 MobiDBLite consensus disorder prediction 440 455 - -
Mtr4g3497 779 MobiDBLite consensus disorder prediction 416 433 - -
Mtr4g3497 779 PANTHER PROTEIN PHOSPHATASE 2C 29 23 777 - -
Mtr4g3497 779 Gene3D - 239 399 IPR036457 -
Mtr4g3497 779 Gene3D - 402 774 IPR036457 -
Mtr4g3497 779 PANTHER PROTEIN PHOSPHATASE 2C 23 777 IPR015655 GO:0004722|GO:0006470
Mtr4g3497 779 MobiDBLite consensus disorder prediction 416 472 - -
Mtr4g3497 779 CDD PP2Cc 475 767 IPR001932 -
Mtr4g3497 779 ProSiteProfiles PPM-type phosphatase domain profile. 251 767 IPR001932 -
Mtr4g3497 779 SMART PP2C_4 251 765 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3497 Mtr-Chr4 48595602 48601809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3497 1 779 PP2C-type Phosphatase Gene Family AT2G35350 54.909 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3497 - - mtr:MTR_4g098650 1537.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3497 4 48595602 48601809 Mtr4g3497 4 48595602 48601809 ECH