Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3495 ATGGAAGGAGCATCGTTGCCACCAGGTTTTCGTTTCCATCCAACCGATGAAGAACTAGTTGGATACTATCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAGCTTGATGTTATTCCAACGATTGATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTCTACCGAAACGAGATTTAGAATGGTTTTTTTATTGTACACGAGATCTAAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCGGTGTAGTTCATCCACTATCACAGGCAACTGCAAAACACTCGTTTTCTATCTTGGAAGGGCTCCTTTAGGCGATAGAACTAACTGGATCATGCATGAGTATCGCCTCACCGATGATCTTAGCCAAGACTCACCATATTTTAAGGGTGGCTTAGCTTTGTGTCGAGTTATAAAAAAGAATGAGAAGAGCAAGAGGGTTGCAACAAGTTCCATCAATGGAAGTGAGACCTCAATGAGATTCTCAAGTGATGTTTCTTCTCAAGCAAGTCACCTGAATAATGGATCACAAAATGTGGCTACAATTGCTGAGTTTAACCATGTTTCCATAGAAACAAATCCTTCAACCTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGAGTATACTAAAGTACAAGATGCACTGTTTGAATATTTTCCTCCTAGTTGTGAATCACCAAGGCAATCATTGGAACATATAACAACTTCACCTACTTTATCCTACTCAAATCTTAATGGTGAAAATGAATTTTCGGATAATGTAAGTCAAAATGGATGCATGTCACCTTACTCAAGTGCTCTAGGGAATTTCATGAACTATAATGGAAATTGGGATGTTCCTTATGAGGTTTATAATCAAATTAACTCAGTCTCATATCCCGAGCCTTTCTAA 957 0.3845 MEGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPTIDFYKFDPWELPEKSFLPKRDLEWFFYCTRDLKYPNGSRTNRATKAGYWKATGKERKIVCRCSSSTITGNCKTLVFYLGRAPLGDRTNWIMHEYRLTDDLSQDSPYFKGGLALCRVIKKNEKSKRVATSSINGSETSMRFSSDVSSQASHLNNGSQNVATIAEFNHVSIETNPSTFWISPDMILDSSKEYTKVQDALFEYFPPSCESPRQSLEHITTSPTLSYSNLNGENEFSDNVSQNGCMSPYSSALGNFMNYNGNWDVPYEVYNQINSVSYPEPF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3495 318 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Mtr4g3495 318 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Mtr4g3495 318 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 318 - -
Mtr4g3495 318 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Mtr4g3495 318 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Mtr4g3495 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3495 Mtr-Chr4 48578092 48580295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3495 1 242 NAC Transcription Factor Family AT4G17980 61.382 1.03e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g3495 NAM 2.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3495 - - mtr:MTR_4g098630 665.225