Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3488 ATGTCGGCTGCATCTGGGACGAGTGAGGAGGAAACACGAGTGTCTTCCGGTGACAACATTCATCCTAGGCTGGATGTCTATATTTGGGACATGGATGAGACCCTTATACTGCTCAACTCTTTGCTGAAATCATCGTATGCCGAGGCTTTCAACGGTTTGAAAGATGTGCAGAAAGGCGTCGAGCTTGGGAAGATGTGGGAAAATCTCATTCTGCAATTGTGCGATGATCATTTCTTCTACGAGCAAATTGAAAGTTACAATAAGCCATTTCTTGATGTTCTGTCCAAATATGATGATGGGAAGGATCTATCTGATTATGACTTCAACCAAGATGAATTAGGCCCTCCGCTTGATGATGCCAACAAAAGAAAACTTGCATACAGGCATCGAATCATAGCCGAAAAATACCTGCAGGGTTTACATAATATTTTAGATCAGGAGACAATAAAAGTATGGAACAATTTGTATAATAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGGCCTGTTTGACGGAGTGTTCTGGTGAAAATAAAGACGTGGTTTCTTCAATTACTTATGCCAACACAAGCACAGACTCAATTAATGCAAAACATCACCATGTGAATGTTTTAGTTACAGCTGGATCATTGATACCATCTCTTGTAAAATGCTTGCTCTTTCATCTGGACAGCTTAATAACACATGGAAATGTGTACAGCTCCTGGGAAGTGGGGAAAATTCAATGTTTCCGATGGATCAAGGATCGCTTCAACCATCCCAATGTTCGCTTTTGTGTAATTGGTGATGGATGGGAAGAGTGTGAAGCTGCAGAAATCATGAAATGGCCGTTTGTTAAGATTGACCCGCGACCAGGAAAATCTCATAGGTTCCCTGGCCTCACATCCAAAACAGTTGGCCACTATTTCTCTGTGGTGTATCCAAACAATGACAATGACGAAGAATGA 957 0.4138 MSAASGTSEEETRVSSGDNIHPRLDVYIWDMDETLILLNSLLKSSYAEAFNGLKDVQKGVELGKMWENLILQLCDDHFFYEQIESYNKPFLDVLSKYDDGKDLSDYDFNQDELGPPLDDANKRKLAYRHRIIAEKYLQGLHNILDQETIKVWNNLYNKTDEYTDKWLSSARACLTECSGENKDVVSSITYANTSTDSINAKHHHVNVLVTAGSLIPSLVKCLLFHLDSLITHGNVYSSWEVGKIQCFRWIKDRFNHPNVRFCVIGDGWEECEAAEIMKWPFVKIDPRPGKSHRFPGLTSKTVGHYFSVVYPNNDNDEE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3488 318 SFLD Haloacid Dehalogenase 25 285 - -
Mtr4g3488 318 TIGRFAM EYA-cons_domain: EYA conserved domain 25 302 IPR006545 GO:0007275
Mtr4g3488 318 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 9 310 - -
Mtr4g3488 318 Gene3D - 25 292 IPR038102 -
Mtr4g3488 318 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 25 285 - -
Mtr4g3488 318 SUPERFAMILY HAD-like 23 287 IPR036412 -
Mtr4g3488 318 PANTHER EYES ABSENT 9 310 IPR028472 GO:0004725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3488 24 316 Protein tyrosine phosphatase (PTP) family AT2G35320 60.410 2.51e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3488 - K17620 gmx:100791661 545.043