Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3475 ATGCTTCCCTTTCTACCACTCCTCCTCTTCCTCCTCTCATTCAACCTTAACCAAGTACTTTCCACACCCCACATCTCTGAATACCACTCCCTCCTCTCCTTCAAATCCTCCATAACAAACGACCCACAAAACATCCTCACCTCATGGAACCCAAAAACCCCTTACTGTTCCTGGTACGGCATTAAATGTTCCCAACATCGCCACGTCATTTCTCTCAACCTCACCTCCCTCTCCCTCACCGGCACCCTTTCCCTCTCCAACCTCCCTTTCCTCACCAATCTCTCCCTCGCCGACAACAAATTCTCCGGCCCAATACCCTCTTCTCTCTCCTCTCTCTCTTCTCTCCGCTTTCTCAACCTCTCCAACAACATCTTCAATGGCACCCTCCCTCAAGAACTCTCTAACCTCTTCAATCTTCAAGTTCTTGACCTCTACAACAACAACATGACCGGTTCACTTCCTGTTTCGGTCACCCATCTTTCTTTTCTCCGCCATTTGCATCTTGGTGGTAACTTCTTCACCGGAAAAATACCACCGGAGTATGGCTCTTGGACTCATTTAGAATATCTTGCTGTTTCTGGTAATGAACTTTCCGGTCACATTCCACCGGAGATTGGTAACATTACTTCTCTTAAAGAGCTTTACATTGGTTACTACAACACCTACGACGGTGGTATTCCACCGGAGATAGGAAATTTGTCGGAGATGGTGAGATTTGATGCTGCTTACTGTGGTTTAACCGGTGAAGTGCCACCGGAGTTGGGTAAGCTTCAGAAGTTGGATACTTTGTTTCTTCAAGTAAATGCACTTTCTGGGTCGCTTACATCGGAGTTAGGGAACTTGAAAAGCTTGAAATCGATGGATTTGTCGAATAATGCTTTCACAGGTGAAGTTCCGGTGAGTTTTGCTGAGTTGAAGAATCTGACACTTTTGAATTTGTTTAGAAATAAGCTTCATGGTGCTATACCGGAGTTTATCGGGGAAATGCCGTCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACTGGAAGTATTCCTCAGAGTTTGGGAAAAAATGGAAAACTCACTCTTGTTGATGTTTCTTCAAACAAGTTAACCGGTTCTCTTCCACCTTTTATGTGTTTTGGTAACAAGCTTCAAACTTTGATAGCTTTAGGGAACTTTCTTTTTGGTCCTATTCCAGATTCACTTGGAAAGTGTAAATCTTTGAATAGAATAAGAATGGGTGAGAATTTTCTTAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCTGAATTGACACAAGTTGAGCTTCAAGATAATCTTTTATCTGGTAACTTTCCTCAACCTGTTTCAATGTCTATAAATCTTGGTCAAGTTACTCTTTCCAACAATAAGCTTTCTGGGCCATTACCACCTTCCATTGGGAATTTCACAAGTGTTCAAAAGCTTATACTTGATGGTAACCAGTTTTCAGGTAAAATCCCTGCTGAGATTGGAAAGTTACATCAGCTTTCTAAGATAGATTTTAGTCATAACAAATTCTCTGGTCCTATTGCGCCCGAGATAAGTCACTGTAAGCTTTTAACTTTCGTTGATCTTAGTCGTAACGAGCTTTCTGGTGAGATTCCTAAAGAAATCACTAAGATGAAGATATTGAATTACTTGAACCTGTCAAGAAACCATCTTGTTGGTACCATTCCAGGTTCTATTGCTTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATATAATAATCTCACTGGTTTGGTTCCTGGTACTGGCCAATTTAGTTACTTTAACTATACTTCTTTCCTTGGTAACCCTGAACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGCGTTGCTAATGGACCTCGTCAACCTCATGTTAAAGGACCACTCTCTTCTACTGTGAAGCTTTTGCTTGTTGTTGGGTTGCTTGTTTGCTCTGCTATATTTGCTGTTGTAACGATATTTAAAGCTAGGTCTTTGAAAAAGGCGAGTGAAGCTCGTGCATGGAAATTAACCGCATTCCAACGATTGGACTTCACGGTTGATGATGTTCTCGATTCCTTGAAAGAGGATAACATCATAGGAAAAGGTGGTGCTGGCATTGTTTACAAAGGTGCTATGCCTAATGGTGATCTTGTTGCTGTGAAAAGGTTACCGGCTATGAGTAGAGGCTCTTCACATGATCATGGTTTCAATGCTGAGATTCAAACTTTGGGGAGAATTCGACACAGACACATTGTTAGATTATTGGGTTTCTGCTCAAACCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGCGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTACAAAATTGCTGTGGAAGCTGCAAAGGGTCTTTGTTATCTACATCATGACTGTTCACCTCTAATTGTTCATCGTGATGTGAAATCAAACAATATCTTGCTTGATTCAGGCTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGACGAAAAAAGCGACGTCTACAGCTTCGGTGTGGTACTTCTAGAGCTTGTAGCAGGAAGAAAACCAGTTGGAGAATTTGGTGATGGAGTAGACATTGTGCAATGGGTGAGAAAAATGACAGATTCAAACAAAGAAGGTGTTCTAAAAGTTCTTGATCCTAGACTTCCTTCAGTTCCACTTAATGAGGTGATGCATGTCTTCTATGTAGCCATGTTATGTGTCGAAGAACAAGCTGTAGAAAGACCAACTATGCGCGAAGTTGTTCAAATGCTCACTGAGCTTCCAAAACCACCTAGCTCAAAACATGTTGAAGAAGACTTAACAACATTAACAATCAATGAATCCTCTTTGTCTTCATCAAACAGTTTAGAGTCTCCATCTAAAGATCCTAAAGATCTTCTTAGCATATGA 3018 0.4109 MLPFLPLLLFLLSFNLNQVLSTPHISEYHSLLSFKSSITNDPQNILTSWNPKTPYCSWYGIKCSQHRHVISLNLTSLSLTGTLSLSNLPFLTNLSLADNKFSGPIPSSLSSLSSLRFLNLSNNIFNGTLPQELSNLFNLQVLDLYNNNMTGSLPVSVTHLSFLRHLHLGGNFFTGKIPPEYGSWTHLEYLAVSGNELSGHIPPEIGNITSLKELYIGYYNTYDGGIPPEIGNLSEMVRFDAAYCGLTGEVPPELGKLQKLDTLFLQVNALSGSLTSELGNLKSLKSMDLSNNAFTGEVPVSFAELKNLTLLNLFRNKLHGAIPEFIGEMPSLEVLQIWENNFTGSIPQSLGKNGKLTLVDVSSNKLTGSLPPFMCFGNKLQTLIALGNFLFGPIPDSLGKCKSLNRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPVSMSINLGQVTLSNNKLSGPLPPSIGNFTSVQKLILDGNQFSGKIPAEIGKLHQLSKIDFSHNKFSGPIAPEISHCKLLTFVDLSRNELSGEIPKEITKMKILNYLNLSRNHLVGTIPGSIASMQSLTSVDFSYNNLTGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSTVKLLLVVGLLVCSAIFAVVTIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLNEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPPSSKHVEEDLTTLTINESSLSSSNSLESPSKDPKDLLSI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3475 1005 SMART serkin_6 689 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3475 1005 Gene3D Phosphorylase Kinase; domain 1 655 766 - -
Mtr4g3475 1005 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3475 1005 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Mtr4g3475 1005 SUPERFAMILY L domain-like 49 368 - -
Mtr4g3475 1005 Pfam Leucine Rich Repeat 163 179 IPR001611 GO:0005515
Mtr4g3475 1005 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 1001 - -
Mtr4g3475 1005 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1001 - -
Mtr4g3475 1005 Pfam Protein kinase domain 691 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3475 1005 Gene3D Ribonuclease Inhibitor 25 176 IPR032675 -
Mtr4g3475 1005 Gene3D Ribonuclease Inhibitor 273 378 IPR032675 -
Mtr4g3475 1005 Gene3D Ribonuclease Inhibitor 177 272 IPR032675 -
Mtr4g3475 1005 MobiDBLite consensus disorder prediction 973 997 - -
Mtr4g3475 1005 Gene3D Ribonuclease Inhibitor 379 615 IPR032675 -
Mtr4g3475 1005 SMART LRR_typ_2 281 304 IPR003591 -
Mtr4g3475 1005 SMART LRR_typ_2 473 497 IPR003591 -
Mtr4g3475 1005 SMART LRR_typ_2 569 592 IPR003591 -
Mtr4g3475 1005 SMART LRR_typ_2 136 160 IPR003591 -
Mtr4g3475 1005 SMART LRR_typ_2 305 329 IPR003591 -
Mtr4g3475 1005 SMART LRR_typ_2 112 135 IPR003591 -
Mtr4g3475 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mtr4g3475 1005 MobiDBLite consensus disorder prediction 965 1005 - -
Mtr4g3475 1005 Gene3D Transferase(Phosphotransferase) domain 1 767 984 - -
Mtr4g3475 1005 SUPERFAMILY L domain-like 299 614 - -
Mtr4g3475 1005 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3475 Mtr-Chr4 48312692 48316776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3475 25 995 Receptor kinase-like Gene Family AT5G65700 80.266 0.0 1578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g3475 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3475 - - gmx:100499646 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0528 5 4982046 4986182 Mtr4g3475 4 48312692 48316776 PCT