Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3458 ATGCTCTCCACCCTCCCTCCCTCAGACCCTCTTCTCGACAACCCATTCTCCGCCTTCCACGGTGGTTTCCCGCAGTGGGATTTTCACGACCTATTTTCAGATGATATCAAACCCACAAGCCCTAAAACTATCACTTCAAGTTCCGGTTCAGATGAACCAAACCAACCCCATGACAAACGTAAACCGGACTCAGACGAACCGAACCACGGGGTGGTCGATGAGCGTAAGCGCCGACGCATGATATCGAACCGGGAATCAGCCCGAAGGTCACGGATGCGTAAGCAAAGACATGTTGAGAATCTAAGGAACCAGTTGAACAAGTGTAGAATGGAAAACCGGGAGATGAAAAACCGGTTACAATTCATTTTGTTTCACTTGAACCGGATACGAACCGAAAATGAATGGCTCCGGTCTGAGCGAACCGTGCTGAACCAAAGAATCAACAACTTTACTCAAATTTTGGTTTGCCAACAATTTCAACCTTTCTCCACTGCATGGACATGTAACACTACTATGGTGGAATAA 525 0.4724 MLSTLPPSDPLLDNPFSAFHGGFPQWDFHDLFSDDIKPTSPKTITSSSGSDEPNQPHDKRKPDSDEPNHGVVDERKRRRMISNRESARRSRMRKQRHVENLRNQLNKCRMENREMKNRLQFILFHLNRIRTENEWLRSERTVLNQRINNFTQILVCQQFQPFSTAWTCNTTMVE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3458 174 SUPERFAMILY Leucine zipper domain 75 122 IPR046347 GO:0003700|GO:0006355
Mtr4g3458 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Mtr4g3458 174 Pfam Basic region leucine zipper 73 119 IPR004827 GO:0003700|GO:0006355
Mtr4g3458 174 Gene3D - 73 123 - -
Mtr4g3458 174 CDD bZIP_plant_GBF1 76 123 IPR045314 GO:0003700|GO:0006355
Mtr4g3458 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Mtr4g3458 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 171 - -
Mtr4g3458 174 MobiDBLite consensus disorder prediction 53 88 - -
Mtr4g3458 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Mtr4g3458 174 PANTHER BZIP TRANSCRIPTION FACTOR 26 171 - -
Mtr4g3458 174 MobiDBLite consensus disorder prediction 34 95 - -
Mtr4g3458 174 MobiDBLite consensus disorder prediction 38 52 - -
Mtr4g3458 174 Coils Coil 84 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3458 Mtr-Chr4 48081894 48082781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3458 1 160 bZIP Transcription Factor Family AT2G22850 35.514 1.11e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr4g3458 bZIP_2 5.1e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3458 - - ahf:112800711 209.149