Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3441 ATGCCATCTTCAACATCAACATCAGTAGCATTCAAAGGCTGTTACTATGTGAGACCAATGGAACCAACATGGTGTGGCCGTTTACCATTATCCGAATGGGATCAGATTGGAATCATAGCACACGTGCCAACAATATACTTTTACCAGCCCCCAAAAAACTGGCTTACCTCCCCCACTAAAATCGCCACCACTTTGAAAGAGTCATTAAGCAAAGTCCTTGTGCCGTTTTATCCACTTGCCGGTCGTTTACACTCGAAAGGAAATGGTCGTTTTGATCTCGAATGCAACTCATTGGGTGTTCAATTCATCGAAGCACAATCCTCGTTAACATTATCCGAACTAGGTGACTTTTCACCTTCTTCGGAATATTACCGTTACCTTATCCCACACATTGATTACACACTCCCAATGGAAGATATTCCACTGGTTATCTTTCAACTCACAAATTTTAATTGCGGTGTAGTTAGTATTAGTTTGTTAATCTCACACGCAGTTGCTGATGGACCAAGCGCGTTGCATTTCATTTTTGAGTGGGCTCGGATTGCACGTGGTGAGCCTTTGAAAATGGTGCCAAGGTTTCTCGATACAAACATGTTGTCGCCAAAACGTTGTAACAGTGTTAATAAATGGGAGCCTGATCAACTTCCTTTATTGTTAGGAAATTTGGATAATGTTGAAGAAAGGAAGAAAAAAACAACGGTGGCTATAATCAACTTGAGTAAAACACAAGTTGAAAAGTTGAGAAAAACCGCAAATGAGAGTTGGAATAAACCTAGTAATGGTCGAGGTTATTCGAGGTATGAAACAGTAACCGGTCATATTTGGAGAAGTGCATGTAAAGCAAGAGAGCATAAAAATGACCAACCAACCGCGCTTGGTGTTTGTGTTGATTGGAGGCGTCGTGTGGAACCTAATTTACCTAAAGGGTATTTTGGGAATGCCATTTTAGATGTTTTGGCTACTAGTCTAGCAGGTGATTTAATGTCTAAACCCTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCGGTTGAGAAAGTGAACGATGAGTATATTAGGTTGGGGAATGAGTACTTTAAGAAGCAAGAAGATTTGACTAAGTTCCAAGATCTTCAAGTTGTAGGGAATGGTGAGAAGGGGCCTTTTTATTGGAATCCTAATTTAGGAGTGACTAGTTGGTTGTCATTGCCAATTTATGGACTTGATTTTGGGTGGGGAAAGGAGGTTTATATGGGGCTAGGAACACATGAAGAACTTGATGGAGATTCATTGCTTCTTCCTAGTCCCAATGATGATGGTTCTTTGTTGGTTATTATTTGTCTACAAGAGATCCATATGGATGTCTTTAAGAAGCATTTTTATCAAGACATTGTGTGA 1374 0.4025 MPSSTSTSVAFKGCYYVRPMEPTWCGRLPLSEWDQIGIIAHVPTIYFYQPPKNWLTSPTKIATTLKESLSKVLVPFYPLAGRLHSKGNGRFDLECNSLGVQFIEAQSSLTLSELGDFSPSSEYYRYLIPHIDYTLPMEDIPLVIFQLTNFNCGVVSISLLISHAVADGPSALHFIFEWARIARGEPLKMVPRFLDTNMLSPKRCNSVNKWEPDQLPLLLGNLDNVEERKKKTTVAIINLSKTQVEKLRKTANESWNKPSNGRGYSRYETVTGHIWRSACKAREHKNDQPTALGVCVDWRRRVEPNLPKGYFGNAILDVLATSLAGDLMSKPLGYASSRIREAVEKVNDEYIRLGNEYFKKQEDLTKFQDLQVVGNGEKGPFYWNPNLGVTSWLSLPIYGLDFGWGKEVYMGLGTHEELDGDSLLLPSPNDDGSLLVIICLQEIHMDVFKKHFYQDIV* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3441 457 Pfam Transferase family 8 454 - -
Mtr4g3441 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 456 - -
Mtr4g3441 457 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 11 456 - -
Mtr4g3441 457 Gene3D - 221 455 IPR023213 -
Mtr4g3441 457 Gene3D - 5 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3441 Mtr-Chr4 47926552 47928168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3441 17 454 Monolignol Biosynthesis Gene Families AT5G48930 38.964 1.10e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3441 K13065 - gmx:100777007 597.816