Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3437 ATGGAGAGTTATTTAAATGAGAATTTTGGAGGTGTAAAGTCCAAGAATTCTACCGACGAAGCTCTTGAAAAATGGAGGAAACTATGCGGTGTTGTAAAGAATCCCAAGAGACGATTTCGTTTCACTGCCAACATCTCCAAACGTTACGAAGCTGCTGCTATGCGTCGCACCAATCAGGAGAAGCTAAGGGTTGCGGTGTTGGTTTCCAAAGCCGCATTTCAATTTATACAAGGTGTTCAACCGAGCGACTACGTTGTACCAGATGATGTTAAAGCTGCAGGTTTCCAAATCTGTGCTGAAGAATTGGGGTCTATTGTGGAAGGCCACGATGTAAAGAAACTCAAGTTTCATGGTGGAGTTGATGGCATTGCAGAAAAGATTTCAACATCAACCACCACGGGACTAGGTGGCGATTCTGAATCGCGACATAGGAGACAAGAGCTTTTTGGCATCAACAAATTTGCCGAAACTGAACTTCGAAGCTTCTGGATTTATGTTTATGAAGCTCTTCAAGACATGACCCTCATGATCCTTGGAGTGTGTGCTTTTGTTTCTCTGATAGTGGGCGTATTGACTGAAGGATGGCCGAAAGGAGCTCATGATGGTCTTGGAATAGTTGCAAGTATCTTACTTGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCGTTACAGTTTAAGGATTTAGACAAGGAGAAGAAAAAGATTTCTATTCAAGTTACGAGAAACGGCTACAGGCAGAAAATGTCGATATACAATTTACTTCCCGGTGATATTGTTCATCTTAACATTGGAGACCAAGTACCTGCAGATGGACTGTTTGTTTCCGGATTTTCAGTGTTGATTGATGAATCAAGTTTAACCGGCGAGAGTGAGCCAATAATGGTGACTACACAAAATCCATTTCTTCTCTCAGGAACAAAAGTCCAAGATGGATCGTGCACTATGTTGGTTACCACTGTTGGAATGAGGACTCAATGGGGTAAATTGATGGCAACTCTTAGCGAAGGTGGAGACGATGAAACACCTTTGCAGGTGAAACTGAATGGAGTGGCAACCATTATTGGAAAAATAGGACTAGTCTTTGCCGTGATAACCTTTACTGTTTTGGTTAAAGGACACTTGAGCCACAAAATCCGAGAAGGAAACTTCTGGAGATGGACTGGTGACAATGCAATGGAGATGTTGGAATACTTTGCTATTGCGGTTACAATCGTCGTCGTTGCTGTTCCCGAGGGTTTACCATTAGCTGTAACATTGAGTCTTGCATTTGCAATGAAGAAAATGATGAATGATAAAGCCTTGGTTAGGCATTTAGCAGCTTGTGAAACTATGGGATCAGCAACAACTATATGTAGCGACAAAACCGGTACACTAACAACCAACCGAATGACGGTTGTGAAAACATGCATTTGTATGAATAGCAAAGAAGTTAGCAATTCTAGTTCGTCGTCTGACATACCAGATTCTGCTGCGAAATTGTTGCTACAGTCGATATTTAATAACACTGGAGGCGAGGTTGTGTATAACAAAAAAGGCAAACGCGAGATATTGGGGACACCAACCGAAACAGCAATATTAGAATTTGGTTTGTCACTAGGTGGAGATTCTAAGGCTGAGAGAGAAGCTTGCAAAATTGTTAAAGTTGAGCCATTCAACTCTGAGAAGAAAAGAATGGGAGTAGTTGTGGAGCAACCTGATGGAAGTGTAAGAGCTCATTGCAAAGGTGCTTCTGAAATAATTCTGGCAGCTTGTGACAAAGTTATTGACTTGAACGGCGATGTTGTTGCTCTTGATGGAGAATCAACTAATTATCTTAACAGTATTATCAACCAGTTTGCTAATGAGGCACTTAGAACTCTTTGCCTTGCCTATATGGAATTGGAAAACGGGTTTGCTGCTGAAGATCCGATTCCTGCTTCTGGTTATACTTGTATTGGAATTGTTGGTATCAAAGATCCTGTTCGCCCCGGTGTTAAGCAGTCTGTTGCAGAGTGTCGTTCGGCTGGAATCGTGGTGAGAATGGTTACAGGAGATAATATTAATACTGCAAAGGCTATAGCTAGGGAATGTGGAATTTTAACAGATGATGGCATAGCTATTGAAGGTCCTGACTTCAGAGAGAAGACTCAAGAGGAATTGTTTGAACTCATTCCCAAGATTCAGGTTATGGCTAGATCATCTCCTTTAGACAAACATACATTGGTGAAACAGCTTCGAACAACGTTCGGGGAAGTTGTGGCTGTAACTGGTGATGGAACAAATGATGCTCCAGCCCTTCATGAAGCTGATATCGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCTGATGTTATAATTCTGGATGATAATTTCTCCACAATTGTGACGGTGGCGAGATGGGGACGTTCCGTTTACATCAATATCCAGAAATTCGTGCAGTTTCAGCTTACTGTAAATGTGGTTGCATTGCTAGTGAACTTCACATCAGCCTGCATGACAGGCAGTGCACCACTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACACTGGGAGCACTTGCGCTTGCGACCGAACCTCCAACCGATGATTTGATGAAGCGTGAACCAGTGGGAAGGAAAGGAGATTTCATCAACAATGTCATGTGGAGGAATATCTTAGGACAAGCATTATATCAGTTTGTGGTCATATGGTTTCTTCAGTCAGTAGGAAAATGGGTCTTTTTTCTCAGGGGTCCCAATGCTGATATTGTCTTAAACACACTCATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCTCGCGAAATGGAGGAAATAGACGTTTTTAAAGGCATATGGGATAATCATGTGTTCGTGGCTGTCATCAGTGCAACTGTGGTCTTCCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAATACAACACCTCTATCTTTGGTACAATGGATCTTTTGCTTAGGGGTTGGATATATGGGCATGCCAATCGCAGTTCGCTTAAAGCAGATACCAGTCTGA 3039 0.4199 MESYLNENFGGVKSKNSTDEALEKWRKLCGVVKNPKRRFRFTANISKRYEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQPSDYVVPDDVKAAGFQICAEELGSIVEGHDVKKLKFHGGVDGIAEKISTSTTTGLGGDSESRHRRQELFGINKFAETELRSFWIYVYEALQDMTLMILGVCAFVSLIVGVLTEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYNLLPGDIVHLNIGDQVPADGLFVSGFSVLIDESSLTGESEPIMVTTQNPFLLSGTKVQDGSCTMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLVFAVITFTVLVKGHLSHKIREGNFWRWTGDNAMEMLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNSKEVSNSSSSSDIPDSAAKLLLQSIFNNTGGEVVYNKKGKREILGTPTETAILEFGLSLGGDSKAEREACKIVKVEPFNSEKKRMGVVVEQPDGSVRAHCKGASEIILAACDKVIDLNGDVVALDGESTNYLNSIINQFANEALRTLCLAYMELENGFAAEDPIPASGYTCIGIVGIKDPVRPGVKQSVAECRSAGIVVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKTQEELFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVARWGRSVYINIQKFVQFQLTVNVVALLVNFTSACMTGSAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKREPVGRKGDFINNVMWRNILGQALYQFVVIWFLQSVGKWVFFLRGPNADIVLNTLIFNTFVFCQVFNEINSREMEEIDVFKGIWDNHVFVAVISATVVFQIIIVEYLGTFANTTPLSLVQWIFCLGVGYMGMPIAVRLKQIPV* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3437 1012 Gene3D - 17 77 - -
Mtr4g3437 1012 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 PANTHER CALCIUM-TRANSPORTING ATPASE 2 1011 - -
Mtr4g3437 1012 Pfam E1-E2 ATPase 237 431 - -
Mtr4g3437 1012 Gene3D - 450 796 IPR023214 -
Mtr4g3437 1012 Gene3D - 168 998 - -
Mtr4g3437 1012 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Mtr4g3437 1012 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Mtr4g3437 1012 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Mtr4g3437 1012 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Mtr4g3437 1012 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 543 696 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 391 495 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 722 837 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3437 1012 SFLD p-type atpase 435 803 IPR044492 -
Mtr4g3437 1012 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 462 655 IPR023299 GO:0000166
Mtr4g3437 1012 PANTHER CATION TRANSPORTING ATPASE 2 1011 - -
Mtr4g3437 1012 Gene3D - 463 655 IPR023299 GO:0000166
Mtr4g3437 1012 SUPERFAMILY HAD-like 451 856 IPR036412 -
Mtr4g3437 1012 CDD P-type_ATPase_Ca_PMCA-like 144 884 - -
Mtr4g3437 1012 Gene3D - 138 336 - -
Mtr4g3437 1012 Pfam Cation transport ATPase (P-type) 511 589 - -
Mtr4g3437 1012 Pfam Cation transporting ATPase, C-terminus 836 1004 IPR006068 -
Mtr4g3437 1012 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Mtr4g3437 1012 SFLD C1.7: P-type atpase like 435 803 - -
Mtr4g3437 1012 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1011 IPR023298 -
Mtr4g3437 1012 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3437 Mtr-Chr4 47880139 47885358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3437 1 1012 Primary Pumps ATPases AT4G37640 80.985 0.0 1692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3437 K01537 - gmx:100776926 1818.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3437 4 47880139 47885358 Mtr4g3437 4 47880139 47885358 ECH
Mtr5g0565 5 5421619 5427444 Mtr4g3437 4 47880139 47885358 PCT