Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3436 ATGGACACATCTTTCCTTTTGTGTGAAGAAGACCACACTTTCCTCCTTATGCACAACAATGATCACAATGAAAATATTAACAATTCCAAGTATGAAGAAAAGGAACATATTGAGTATTTGTTTCAACTTGAAAAAACAGAATCTATGTCCTTCAATTATTGCTCCAACTCAACCATAGGCCTTGTCCATTTCAACAACATACGTGTTAATGCCATTGACCACATTTTCAATACAAGGGAAAAACTTGGATTCAAGCTATGCACAGCTTATTTATCAGTGACATACTTTGATCAGTTTCTTTTGAAGCAACACATACACATCCATGAAGACAGGCCTATTCAACTATTATATGCGGCGTGCTTGTCTCTGGCAGCTAAGATGACAGAAGAGCGTGATCTATCGCTTCTACTTAAATGCATAACAGAAATCGACCAAGAGGGAGGTTTTATTGTCAAGCAATGTATTAGGCAGATGGAGGTAGAGGTTTTTAGTACATTGGAATGGGAATTGACAACTGTGACTCCTTTTGATTTTCTGCATTACTTTGTTTACTTGTTCTGCCCTGAATCTTCATCAGAACCATTAATCTCACAAGCTGTTGAACATGTTCTGGATATCCTAAAAGATGTTAATTTGATGGATCTTAGGCCATCTGTTATTGCATTGGCTGCCACATTGATGGTAACTTTTGATGCTACATTAACAAGAGAGATCATGGATTTGCACATAGGTGATATCTTATTGCAGCTAAATTTAGATACTGTGAGTTTTCCTAGCAGTTCATTATCTAGTTTTTGTTTCATGTGTGTGATCGTAAATAAACACAGTTTTATTATGCTTTTCATTTTGTATTCAACACAGGAAGGTGTGTTTTACTGTTACCATCTAATGAAGGAAAAAAGTAAAGAGAAGGGAAAGTTAAACACTTCTGTCTCAACTTTGACTTCCCAATGGAGCTATACATCTGTTCTTGACCATTCTGTCTCTTCTTCTATAGCCAGGAGAAAATTTGGTTTTGACAACAAAGAAAATTGTCCTAGGCAAAGATCACATTGGTCTTAG 1062 0.3616 MDTSFLLCEEDHTFLLMHNNDHNENINNSKYEEKEHIEYLFQLEKTESMSFNYCSNSTIGLVHFNNIRVNAIDHIFNTREKLGFKLCTAYLSVTYFDQFLLKQHIHIHEDRPIQLLYAACLSLAAKMTEERDLSLLLKCITEIDQEGGFIVKQCIRQMEVEVFSTLEWELTTVTPFDFLHYFVYLFCPESSSEPLISQAVEHVLDILKDVNLMDLRPSVIALAATLMVTFDATLTREIMDLHIGDILLQLNLDTVSFPSSSLSSFCFMCVIVNKHSFIMLFILYSTQEGVFYCYHLMKEKSKEKGKLNTSVSTLTSQWSYTSVLDHSVSSSIARRKFGFDNKENCPRQRSHWS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3436 353 Gene3D - 39 232 - -
Mtr4g3436 353 Pfam Cyclin, N-terminal domain 37 170 IPR006671 -
Mtr4g3436 353 SUPERFAMILY Cyclin-like 29 170 IPR036915 -
Mtr4g3436 353 PANTHER AMINO-TERMINAL DOMAIN CYCLIN 31 255 - -
Mtr4g3436 353 CDD CYCLIN 68 162 IPR013763 -
Mtr4g3436 353 Gene3D - 50 171 - -
Mtr4g3436 353 PANTHER CYCLINS 31 255 IPR039361 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3436 4 246 Core Cell Cycle Gene Families AT4G37630 30.116 6.82e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3436 K18811 - gmx:100808000 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3436 4 47878137 47880015 Mtr4g3436 4 47878137 47880015 ECH
Mtr5g0568 5 5467983 5470179 Mtr4g3436 4 47878137 47880015 ECH