Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3434 ATGGGTGAAGTAGTAGTTGTGAATGTGAGAGAGTTTGATCCTAATAAAGATAGAGAAAGTGTTGAAGCAGTTGAAAAAATATGTGAAGTTGGACCCAGTGGTAAGCTTTCCCTCTTCACCGACTTGCACGGTGACCCTATTTGCAGAGTCCGTAACTCACCAACTTTTCTCATGCTGGTAGCAGAGATAGGCAATGAGACAGTCGGAATGATACGAGGTTGTATCAAAACCGTTACATGCGGCAAAAAACTCACAAGACCAACAAAAAACAGCACAGAAACAAATCAAAATTCCAATCATGTCCCTGTTTTCACAAAACTAGCCTACGTTTTAGGCTTAAGAGTTTCTCCAAATCATAGAAGAATGGGAATAGGGCTAAAACTGGTAGAGAAAATGGAACAATGGTTTCGTGAAAATGGTGCTGAGTATTCTTACATGGCTACTGAAAACGATAACGTTGCATCAGTTAAACTTTTCACCGACAAATGCGGTTACTCAAAGTTCCGTACACCGTCAATCCTTGTTAACCCCGTTTTCAAACACCGTCTCAAAACATCATCGTCCAAAACAACAATCCTTAAACTCACACCAAACGACGCTGAAACACTTTACCGTTACAAATTCTCCACCACTGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACCCTCGGAACCTTCTTAGCCATTCCAAGAGACGGAAAATATGGGGCCGGATCAGATAACTGGTCCGGCTCCGAAAGCTTTTTAATGGACCCACCGAGTTCGTGGGCTTTAGTAAGTGTTTGGAACTGCAAAGACGTGTTTACCCTTGAAGTAAAAGGCGCATCGCGCGTGAGACGTGTGTTAGCAAAAACAACTCGACTGATAGACAAGGCTTTACCTTGGTTAAAATTACCTTCGATTCCGAATTTTTTCAAACCGTTTGGGTTTCATCTAATGTATGGAATTGGTGGGGAAGGAGCAGAAGTGTTGAAGATGGTGAAAGCTTTGTGTGGTTTTGCTCATAATCTTGCAATGGAAAATGGGTGTAGTGCTGTGGCAACTGAAGTTTCTAGCTGTGAACCGTTACGTTTTGCTATTCCTCATTGGAAGGTTTTGTCTTGTGAAGAAGATTTGTGGTGTATTAAGAGATTAGGAGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCCAAACCTGGTTTCTCCATTTTTGTTGACCCTAGAGAGTTTTAA 1236 0.4118 MGEVVVVNVREFDPNKDRESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGNETVGMIRGCIKTVTCGKKLTRPTKNSTETNQNSNHVPVFTKLAYVLGLRVSPNHRRMGIGLKLVEKMEQWFRENGAEYSYMATENDNVASVKLFTDKCGYSKFRTPSILVNPVFKHRLKTSSSKTTILKLTPNDAETLYRYKFSTTEFFPRDIDSVLKNKLTLGTFLAIPRDGKYGAGSDNWSGSESFLMDPPSSWALVSVWNCKDVFTLEVKGASRVRRVLAKTTRLIDKALPWLKLPSIPNFFKPFGFHLMYGIGGEGAEVLKMVKALCGFAHNLAMENGCSAVATEVSSCEPLRFAIPHWKVLSCEEDLWCIKRLGEDYSDGSVGDWTKSKPGFSIFVDPREF* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3434 411 Pfam Acetyltransferase (GNAT) family 52 165 IPR000182 GO:0016407
Mtr4g3434 411 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 2 411 - -
Mtr4g3434 411 CDD NAT_SF 58 143 - -
Mtr4g3434 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 198 IPR000182 GO:0016407
Mtr4g3434 411 Gene3D - 43 171 - -
Mtr4g3434 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 167 IPR016181 -
Mtr4g3434 411 PANTHER N-ACETYLTRANSFERASE 2 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3434 Mtr-Chr4 47848706 47850617 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr4g3434 Acetyltransf_1 7.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3434 - - gmx:100804109 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3434 4 47848706 47850617 Mtr4g3434 4 47848706 47850617 ECH
Mtr5g0574 5 5550267 5552249 Mtr4g3434 4 47848706 47850617 PCT