Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3433 ATGGCCGTAAAACATTTGCAATTCCAATTCAACTTGTCGCGCGATAGATTGGTCTTTCTCTTTCGAACATCTCAATCTCATTCTTTATTTCCTTATAATAATAAATTCCCCAAATCTTTTCTCTCTTTCTTCCTCCACCGCTCCTCCTCAACAACTCCGTCGCCGCCGAACAACCATCTCCGCCGTCCGCGGCCTCCTCCTCCTCCACCCGTCGACATGGCGCAGAAATTCGGAAAATCCACTCGCCGCCCCGGCGCTGCATCCAAGGCTAGGGTTTATGCTGATGTCAACGTTGTTCGTCCTAAGGAATATTGGGATTACGAAACCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAAGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAAGGTGTTCATTGTACTGATAATGAAAAATGTGTTATTAAGATTCTCAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCAAGTCTCATATTTGAATATGTCAATAACACTGATTTTAAAGTACTCTATCCTACACTGTCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGCATTGGATTATTGCCATTCGCAAGGGATCATGCATCGGGATGTGAAGCCCCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAGGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTTGATTTGTGGAGTCTTGGTTGTATGTTTGCCGGGATGATATTCCGGAAGGAGCCGTTCTTTTATGGTCACGATAACTATGATCAACTGGTCAAGATAGCCAGGGTACTTGGGACGGATGAATTGAATGCATATTTGAATAAGTATCGCATTGAGTTGGACCCACATTTTGCAGCACTTATTGGGAGGCATAGCAGGAAGCCATGGCAAAGGTTCATTAATGTTGAAAATCAACACTTGACTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTGCGATACGATCACCAAGAACGGCCCACTGCAAAAGAAGCCATGGCTCATCCATACTTCAATCCAATTAGAAATGCGGAAAGTAGCAGAGCTCGTGCACATTGA 1260 0.4349 MAVKHLQFQFNLSRDRLVFLFRTSQSHSLFPYNNKFPKSFLSFFLHRSSSTTPSPPNNHLRRPRPPPPPPVDMAQKFGKSTRRPGAASKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARVLGTDELNAYLNKYRIELDPHFAALIGRHSRKPWQRFINVENQHLTVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAESSRARAH* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3433 419 SUPERFAMILY Protein kinase-like (PK-like) 93 409 IPR011009 -
Mtr4g3433 419 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Mtr4g3433 419 PANTHER CASEIN KINASE II SUBUNIT ALPHA 72 411 IPR045216 GO:0004674|GO:0006468
Mtr4g3433 419 MobiDBLite consensus disorder prediction 51 86 - -
Mtr4g3433 419 CDD STKc_CK2_alpha 101 405 IPR045216 GO:0004674|GO:0006468
Mtr4g3433 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Mtr4g3433 419 Pfam Protein kinase domain 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3433 419 MobiDBLite consensus disorder prediction 58 73 - -
Mtr4g3433 419 Gene3D Phosphorylase Kinase; domain 1 120 196 - -
Mtr4g3433 419 PANTHER BNAA04G13490D PROTEIN 72 411 - -
Mtr4g3433 419 SMART serkin_6 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3433 419 Gene3D Transferase(Phosphotransferase) domain 1 197 405 - -
Mtr4g3433 419 ProSiteProfiles Protein kinase domain profile. 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3433 Mtr-Chr4 47822205 47828876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3433 118 408 Core Cell Cycle Gene Families AT3G48750 32.237 7.15e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mtr4g3433 Pkinase 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3433 K03097 - gmx:100776388 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3433 4 47822205 47828876 Mtr4g3433 4 47822205 47828876 ECH