Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3429 ATGACGCAATTCACACATTCACTACCTTATTTGCACCAAACAACAACAACTTTTTCAAACCCTTCTTCTTCCATGAACAAAAACAATCAAGTACCGCCAGATAAGCCTACTAAACCATGGTTCCCAACATCCAAAGCTTTAACTACCTTTGGAGACACAAACTGCATGGAACAGTTACTTGTTCATTGCGCAAACGCAATCGAAACAAACGATGTAACACTTGCTCAGCAAATCCTTTGGGTTCTCAATAACATAGCACCACAAGACGGTGATTCAAATCAACGCTTAGCTTATAGTTTCCTTAGAGCCCTCACAAATCGTGCAGTGAAAACCGGTACCTGTAAAATGCTAGTAGAACAAGTTTATTCAAATGCTCATAACAATCTCACCATAGATACACACAGATTCTCAGTCATTGAACTAGCCAACTTCGTGGATTTAACACCTTGGCATCGATTTGGGTACGCAGCTGCTAATGCAGCAATTCTGGAAGCAACAGAAGGTTTCTCAGTGATTCATATAGTTGATTTGAGTTCAACTCATTGCATGCAGATTCCTACATTAATCGATGCTATTGCTAATCGCCACGAAGTTGCTCCTTTAATCAAACTCACTGTTTCTGATCATGCTAATTGCAACAGTGATCAACTAATTCCACCAAAACTTGATCTTTCTTATGAAGAATTAGGTTCTAAGTTGGTGAATTTCGCTAGGTCAAGAAACGTGACATTGGAATTCAGAGTAGTTTCTTCAAGTTACACAAATGGTTTTGCTTCTTTGATTGAACATTTGAGGGTTCAACGTTTGGTTTATTCAGGTGAAGCTTTGGTTATAAATTGTCACATGATGCTTCATTATATTCCTGATGAAACCCTATCAAATTCAAACTCATATGTTTATGATTCTATGTCCTCTACTACTACTGCTACTACTATTACTACTACTACTACGTCTCTTAGGTCATTGTTTCTTAACGCGCTTCGAGGTTTAGATCCAACACTTGTTATTTTAGTAGATGAAGATGTTGATTTAACTTCAAACAACTTGGTTAGTAGATTAAGGTCCGCATTTAATTATCTATGGATACCTTATGATACCGTGGACACATTTCTACCGCGTGGAAGTAAGCAAAGGCAATGGTATGAAGCAGATATTTGTTGGAAGATTGAAAATGTGATAGCTCATGAAGGTGTTCAAAGAGTTGAGAGAGTTGAACCTATAAGCAAATGGGAACAAAGAATGAGAAATGCTAATTTTCAAGGGATTGGATTTGGTGAGGAATGTGTTGGTGAGGTGAAAGCTATGCTTGATGAACATGCTGCTGGATGGGGATTGAAGAAAGAAGATGAGCATATTGTGCTTACTTGGAAAGGCCATAATGTTGTTTTTGCTTCTGCTTGGTTACCTGCTTAA 1413 0.38 MTQFTHSLPYLHQTTTTFSNPSSSMNKNNQVPPDKPTKPWFPTSKALTTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAVKTGTCKMLVEQVYSNAHNNLTIDTHRFSVIELANFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANCNSDQLIPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSNSNSYVYDSMSSTTTATTITTTTTSLRSLFLNALRGLDPTLVILVDEDVDLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPISKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3429 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 468 IPR005202 -
Mtr4g3429 470 MobiDBLite consensus disorder prediction 13 40 - -
Mtr4g3429 470 ProSiteProfiles GRAS family profile. 47 468 IPR005202 -
Mtr4g3429 470 MobiDBLite consensus disorder prediction 13 33 - -
Mtr4g3429 470 Pfam GRAS domain family 56 467 IPR005202 -
Mtr4g3429 470 PANTHER SCARECROW-LIKE PROTEIN 32 31 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3429 Mtr-Chr4 47754459 47756313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3429 36 469 GRAS Transcription Factor Family AT3G49950 56.916 3.67e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g3429 GRAS 3.8e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3429 - - cam:101509453 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3429 4 47754459 47756313 Mtr4g3429 4 47754459 47756313 ECH