Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3427 ATGGGTCGTTATAATGTTATACTTGTGTGGTCACTAGCATTAACGTTGTGTCTTATTCCATATACAACTTTTGCTCAACTTAGTCCAAACCATTATGCTAACATTTGTCCTAATGTTCAAAGCATTGTAAGATCAGCAGTTCAAAAGAAATTTCAACAAACTTTTGTTACTGTTCCTGCTACCCTTCGTCTCTTCTTTCATGATTGTTTTGTTCAGGGTTGTGATGCTTCAGTTTTGGTGGCATCAAGTGGAAATAACAAAGCTGAAAAGGATCATCCTGAAAATTTGTCATTGGCTGGTGATGGTTTTGACACAGTGATTAAAGCAAAAGCTGCATTAGATGCTGTTCCACAGTGCAGAAACAAAGTTTCTTGTGCTGATATTCTTGCTTTGGCTACTCGAGATGTTATTAATCTGGCTGGTGGTCCATCCTATACAGTAGAATTGGGAAGGTTTGATGGTCTAGTTTCAAGATCTTCAGATGTAAATGGAAGGCTCCCTCAGCCAAGTTTCAATTTGAATCAGCTGAATACTCTCTTTGCAAACAATGGACTCACTCAAACAGACATGATTGCCCTATCAGGTGCACACACTCTTGGATTCTCTCACTGTGACAGATTCTCCAATAGAATTCAAACTCCAGTGGACCCCACATTGAACAAACAATATGCTGCCCAGTTACAACAAATGTGCCCTAGGAATGTTGATCCAAGAATAGCCATCAACATGGACCCAACAACTCCTAGAACATTTGACAATGTTTACTACAAAAATCTTCAACAAGGAAAAGGTTTATTTACTTCTGATCAAATCCTCTTCACTGATACAAGATCAAGGAACACTGTTAACTCTTTCGCGACTAACGGTAACGTTTTCAATGCCAATTTCATCACTGCCATGACCAAGTTGGGTCGTGTTGGAGTTAAAAATGCGAGAAATGGGAAAATTCGTACCGATTGTTCTGTGCTTTAA 972 0.3899 MGRYNVILVWSLALTLCLIPYTTFAQLSPNHYANICPNVQSIVRSAVQKKFQQTFVTVPATLRLFFHDCFVQGCDASVLVASSGNNKAEKDHPENLSLAGDGFDTVIKAKAALDAVPQCRNKVSCADILALATRDVINLAGGPSYTVELGRFDGLVSRSSDVNGRLPQPSFNLNQLNTLFANNGLTQTDMIALSGAHTLGFSHCDRFSNRIQTPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYKNLQQGKGLFTSDQILFTDTRSRNTVNSFATNGNVFNANFITAMTKLGRVGVKNARNGKIRTDCSVL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3427 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 Gene3D Peroxidase, domain 2 168 304 - -
Mtr4g3427 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Mtr4g3427 323 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Mtr4g3427 323 PANTHER - 1 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g3427 323 Gene3D - 31 321 - -
Mtr4g3427 323 PANTHER PEROXIDASE 1 323 - -
Mtr4g3427 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3427 Mtr-Chr4 47731425 47734488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3427 1 323 Peroxidase AT5G67400 66.768 1.73e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3427 K00430 - gmx:100817540 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3427 4 47731425 47734488 Mtr4g3427 4 47731425 47734488 ECH
Mtr4g3427 4 47731425 47734488 Mtr5g0582 5 5659688 5662176 PCT