Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3413 ATGTATCCAAATTCACAAGAACAATCACAACCACTTATAGTGGAAGAACAAGAAGAAGAAAAGCCACAAGAAACAGCATATGATTCATCAGAAAAGATAGTGGTGGTAGGAATAGACGAATCCACAAACTGGGGTACCTCGGTGCCACCATTTTCATGGAAGAAGCTATGGCTATTCACTGGACCTGGTTTTCTAATGAGTATAGCGTTTTTGGATCCAGGGAACTTAGAAGGAGACCTACAAGCTGGTGCCATTGCTGGGTATTCTTTGTTATGGCTTCTTATGTGGGCCACAGCTATGGGACTTTTGATTCAGCTTTTGTCAGCTAGGCTTGGTGTGGCTACAGGGAAGCATTTGGCTGAGCTTTGTAGGGAGGAGTATCCTAGATGGGCTAGGTATGTGCTTTGGGTTATGGCTGAGTTTGCTCTTATTGGTTCTGACATACAAGAGGTTATTGGTAGTGCTATTGCTATTAGGATTCTTAGTAATGGAGTTATTCCTCTTTGGGCTGGTGTTGTCATTACTGCTCTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGACATTGGAAGCTTTTTTTGCTGTTCTCATTGGTGTAATGGCACTTGCTTTTGCATGGATGTTTGGTGAGGCAAAGCCAAGTGGCAAAGAACTTCTAGTTGGTATTTTGGTTCCAAAACTCAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTGGGATGTCTTATAATGCCTCACAATGTATTCTTGCATTCGGCTCTTGTTCAGTCAAGGCAAGTTGATCACAGCAACAAAGGCCGAGTTCAAGAAGCGCTTAACTATTACTCAATAGAGTCAACAATTGCCTTGATAGTCTCCTTTATCATTAACATATTCGTCACAGCTGTGTTTGCAAAGGGGTTTTATGGTTCCGAAGTAGCAAATAAAATAGGCCTTGAAAATGCAGGACAGTATCTTCAGGAGACATATGGAGGTGGAGTTTTTCCGATATTGTATATATGGGGTATTGGGTTGTTAGCAGCTGGTCAAAGTAGCACTATAACTGGTACTTATGCTGGACAATTTATCATGGGAGGCTTTCTAAATTTAAGGTTGAAGAAATGGATGAGGGCATTGATTACTCGTAGTTTTGCAATAGTCCCAACCATGATAGTTGCTCTTATGTTTGATGCTACGGAGGACTCACTAGATGTTCTGAATGAGTGGCTTAATGTACTTCAATCGGTTCAAATTCCCTTTGCGCTTATTCCTTTGCTTTGTCTTGTGTCGAAGGAGCAGATAATGGGCACTTTCAAAATTGGCCCTGTCCTCAAGATTTTTTCGTGGAGTGTGGCTGCTCTTGTGACAGTGATTAACGGCTATCTGTTGTTGGAATTCTTCTCGGCTGAAGTGAATGGAATAATAGTTGGTGTTGTAGTGTGTACAATAACCGCTGCATATGTTGCATTCATAATATATCTTATTCTGCGGGCGACCACATTTTCACCTTGGCAAAGTGTAACGCGACCAAAGGCGATACTTCCCTCAGATAGTTGA 1548 0.4154 MYPNSQEQSQPLIVEEQEEEKPQETAYDSSEKIVVVGIDESTNWGTSVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYPRWARYVLWVMAEFALIGSDIQEVIGSAIAIRILSNGVIPLWAGVVITALDCFIFLFLENYGVRTLEAFFAVLIGVMALAFAWMFGEAKPSGKELLVGILVPKLSSRTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDHSNKGRVQEALNYYSIESTIALIVSFIINIFVTAVFAKGFYGSEVANKIGLENAGQYLQETYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTMIVALMFDATEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGPVLKIFSWSVAALVTVINGYLLLEFFSAEVNGIIVGVVVCTITAAYVAFIIYLILRATTFSPWQSVTRPKAILPSDS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3413 515 Hamap Divalent metal cation transporter MntH [mntH]. 41 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 17 510 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 17 510 - -
Mtr4g3413 515 MobiDBLite consensus disorder prediction 1 27 - -
Mtr4g3413 515 Pfam Natural resistance-associated macrophage protein 77 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 135 161 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 165 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 190 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 239 262 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 346 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 374 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 PRINTS Natural resistance-associated macrophage protein signature 408 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3413 515 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 54 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3413 Mtr-Chr4 47603045 47606627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3413 49 501 Inorganic Solute Cotransporters AT2G23150 81.898 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3413 K21398 - gmx:547711 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3413 4 47603045 47606627 Mtr4g3413 4 47603045 47606627 ECH
Mtr5g0599 5 5809076 5813264 Mtr4g3413 4 47603045 47606627 PCT