Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3408 ATGACCCAGTTCTTCTATCACATTCTCCTTGCTATTATCTCACTCTTAACACTAAAATTTGTAATAATCACAACAAGAAAACTCAAAAACCTTCCACCAGGTCCATCAAGTATTCCAATTATAGGCAACATTCATCAACTCAAACACCCACTTCACCGTACCTTCCACACTCTCTCACAAAAATACGGTCAAGTCTTTTCCCTACGGTTCGGTTCACGTTTTGTCGTCGTTGTTTCATCACCTTCTGTCGTACACGAATGTTTCACAAAAAATGACACTATTTTAGCAAACCGGCCACCTCTTCTGGCAGGCAAACACATCGGATACAACTACACCGCGGTAACCGTTGCTCCTTATGGCGATCACTGGCGTAACGTCCGTCGTATAATCTCCCTTGACGTTCTCTCAACACACCGTTTAAACTCATTTTTACGTATTAGAAAAAACGAAATCATGAAACTCATGCAAGCCCTAGCTCGTGGTTCTAGTTCTAGTTCTAGCGACGGTTTTGTGAGAGTGGAGTTGAAAACAAAGCTTTCGGAGATGACTTTTAACACGATAATGAGAATGATATCTGGAAAGAGATATTATGGTGAGGATTGTGATGTGAGTGATGAAGAAGAAGCTAAGGGATTTAGGGAGATGATTAAGGAGATGGTATCGTTGGGTGGTTCGAGTAATCCTGGTGAATTTGTTGGGATTTTGAGGTGGTTTGATTTTGGTGGTTATGAAAAGAAGTTGAAAAGGATTGCAAGAAGATTTGATGGGTTTTTGCAAGGTTTGATTGATGAGCATAGGAGGAAGAAGGAGAAGGGGAATAACATGATTGATCATCTCTTGAACTTGCAAGAATTATCACAGCCGGAGTATTATACTGATCAAATCATCAAAGGGATTGTTCTGGTCATGATCCTTGGAGGAACAGAAACATCAGCTACAACTCTAGAATGGGCAATGTCTGCTTTGCTAAATCATCCAGAAGTGTTAAAGAAAGCAAGGGATGAAATAGATACAAACATAGGACAAGATCACTTAGTAGAAGAGTCAGACATTTCAAAACTCCCCTACCTACAAAATATAATCCACGAGACATTTCGATTGCATCCTGCATTTGCATTGTTGGCTCCTCATTTTTCTTCACAAGATTGCACCATAGGAGGTTATATTGTCCCAAAAAACACTATTTTATTGGTTAATGCTTGGGCAATTCACAGAGATTCTCAACTATGGAGTGACCCAACACAATTCAAGCCAGAGAGATTTGACAAAGAAGGAGAAGCTGATAAGTTGATTCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGAGCAAACTTAGGGCAACGTACAGTTAGTTTAACTTTGGCATTACTTATCCAATGTTTTGATTGGAAAAGAATAAGTGAGGAAGAAATTGATATGACTGAAGGAAAAGGAGCCACTACTCCGAAGCTAATTCCCTTGGAGGCCATGTGTAAAGCTCGTTCAAATGTCATCAACAAGGTTTATCTAAAAGTTGATGAAAACATGTAA 1530 0.3967 MTQFFYHILLAIISLLTLKFVIITTRKLKNLPPGPSSIPIIGNIHQLKHPLHRTFHTLSQKYGQVFSLRFGSRFVVVVSSPSVVHECFTKNDTILANRPPLLAGKHIGYNYTAVTVAPYGDHWRNVRRIISLDVLSTHRLNSFLRIRKNEIMKLMQALARGSSSSSSDGFVRVELKTKLSEMTFNTIMRMISGKRYYGEDCDVSDEEEAKGFREMIKEMVSLGGSSNPGEFVGILRWFDFGGYEKKLKRIARRFDGFLQGLIDEHRRKKEKGNNMIDHLLNLQELSQPEYYTDQIIKGIVLVMILGGTETSATTLEWAMSALLNHPEVLKKARDEIDTNIGQDHLVEESDISKLPYLQNIIHETFRLHPAFALLAPHFSSQDCTIGGYIVPKNTILLVNAWAIHRDSQLWSDPTQFKPERFDKEGEADKLIPFGLGRRACPGANLGQRTVSLTLALLIQCFDWKRISEEEIDMTEGKGATTPKLIPLEAMCKARSNVINKVYLKVDENM* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3408 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Mtr4g3408 509 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 497 - -
Mtr4g3408 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3408 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3408 Mtr-Chr4 47515866 47519671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3408 8 497 Cytochrome P450 AT4G37330 56.478 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3408 K13260 - gmx:100811727 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3408 4 47515866 47519671 Mtr4g3408 4 47515866 47519671 ECH