Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3407 ATGGCAATTCAACACTCTATCATTTTACTGGCTTTTCTTCTTCTTCAATTCTCATCACTACACTTCCCTGCACTCGGATACGATCATCAAGAGACATACTTCATCAATTGTGGATCAGATATCGACGTGAATGAAAATAAGAATCTTTATATTGGTGAATCAAACCATGCTTACCCTAAAAAATCATTCAGCCAAAGAAGTTCCATAGAAACCAATCCATCATCAGTGTCTTCACCTCTTTACCAAACAGCAAGAATTTTCCATTCTGAATCCTCCTACGAATTTTCTACCATACCAAACAACACTTATATGGTACGTTTCCGTTTCTTTTCATTCTCTTCACCAACTAAACTTTCCACTGCAAAATTCAACATTTCCGTTCCTGGTTTCCTTCTGTTACATAATTTCAACGCTGAAAACACCACCAAATCTGCTTTAGTAAAAGAGTATTACGTTAAAATCATTAGAAAAAGATTCAAAATCATATTCACACCTCAAACATCATCATTTGCGTTTGTTAATGCAATAGAACTCTTTATGCTTCCGGTTCATTTAATCCCTGATTCAATGCCACATTTCTCTTACAAAGAATCTGGTGTTCGAGGAGGCTTATCTACTTATATTGGCGGTTTACACTCACAACGAGCCTTGGAAACAAAACATCGTTTTAACGTCGGTGGGGGAACCGTTGATAGAGGAACTGATACTTTATCGAGAGAATGGTTACCAGATGACAGATATGTAACTAATCTACAAAACGCTAAGAATTGCTCCTTTGACGGTGATATTCCACGCACTGCAAATGATACGTCTGATGGTCCAAATTCAAATCAATATATTGCTCCAGATATTGTTTATAAAACTGGCAAAGAGAGTATTAACGGTTCTAGCAGCATAAGTTGGAGTGTTCCTGTAGAGAAGAACGTAGATCATTTTCTTAGGTTTCATTTTTGTGACGTTTTCAGTAATCGACAATCTGGTCTTACAGATTTCCTTCTCTTAATTTATGACAATTATGTTGTGAATGTCAATAATGACACAAGTTTGTCACTACAAATGCCTTATTATTATGATTTTGTGGTTCAATCCGATGCCTCTGGGAAACTGAAGGTTACCGTACAACCTAATGTGTTGGATTTTGTACCGAACGCATTTTTAAATGGACTAGAACTAATGACAGTGGTTAACTCCTCGGGTCCAATTCCCCCTGATGATTTGGATTCGGGGAAGATTAGTCTTCCTGTGGTGCTGGGTTCGGTCGTTGGAGGTTTAGTTCTGGTTTCTGTTGTTGTGGTTTTGTTTCTTTGGATTAGTAAAATCAGGAAACAAAGGCCTGTTGAGAGTTTCGATTTGTTGCCGATTCCAACTGCTGCAGGAGGGATTTCTCATAGCAAATTAACTTATGGAAAAACAACTCAAGGCTCACCTTTACCTAACATAAACCTTGGCATGAAAATCTCCTTGCTTGACCTTCAAATCGCCACCGAGAATTTTGATACAAAGAGGATTATTGGAAAGGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGAATGTGGCAGTGAAAAGAAGCGTGCCAGGTTCAGGTCAAGGACGTCATGAATTTCAAACTGAGATAATGGTTTTGTCCAAGATTCGTCACATACACCTTGTTTCCTTAATTGCATATTGTGATGAAAGGTGTGAGATGATACTTGTTTACGAGTACATGGAAAATGGGACACTTAGAGATAATTTGTACGATACAAATTTGCCTTGTTTGACTTGGAAGCAAAGGCTTGAGATTTGCATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGTAGCCGGTGGAATAATCCACCGTGATGTGAAATCCACTAATATATTGCTTGACGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGGTCCTCTTGATCAACATTCTTATGTCAGCACATGTGTTAAAGGGACTTTTGGGTATCTTGATCCGGATTACTTTAGATCACAACAGCTTACAGAAAAATCCGATGTTTACTCTTTTGGGGTGGTTCTACTTGAAGTGTTGTGCGCAAGACCAGCCATAGAACTGTCTTGTCCAAGTGAGCAAGTCAATTTGGCTGAGTGGGGATTGCATTGCAAAGACAAAGGGATACTTGAAGAGATCGTTGATCCTTCCATCAAGGCACAAATCAATCAAAACTCACTAAGAATATTTAGTGAGACTGTGGAAAAATGCTTACACGATTATGGGTGTGATAGGCCAACAATGGTTGATGTGTTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGAACCGCATGAGGATAGTTCTAGCAGTGCTTTTGCATCACTTCAATTGCCTAATGTTCAGCATTTACCTTCTCTGTCTACACCGACTGAAGTGGATGGCACGTCTACTGGGAGGATTGATGAATCTGAAAGTGCAACATTGATGATGCTAGATAGACTTTCATGCGAAGCAAATCAAGGCACAACAATCAACACGCAAATGTCTCCAATGGAGGAGCTGTTTCTTTAG 2556 0.3908 MAIQHSIILLAFLLLQFSSLHFPALGYDHQETYFINCGSDIDVNENKNLYIGESNHAYPKKSFSQRSSIETNPSSVSSPLYQTARIFHSESSYEFSTIPNNTYMVRFRFFSFSSPTKLSTAKFNISVPGFLLLHNFNAENTTKSALVKEYYVKIIRKRFKIIFTPQTSSFAFVNAIELFMLPVHLIPDSMPHFSYKESGVRGGLSTYIGGLHSQRALETKHRFNVGGGTVDRGTDTLSREWLPDDRYVTNLQNAKNCSFDGDIPRTANDTSDGPNSNQYIAPDIVYKTGKESINGSSSISWSVPVEKNVDHFLRFHFCDVFSNRQSGLTDFLLLIYDNYVVNVNNDTSLSLQMPYYYDFVVQSDASGKLKVTVQPNVLDFVPNAFLNGLELMTVVNSSGPIPPDDLDSGKISLPVVLGSVVGGLVLVSVVVVLFLWISKIRKQRPVESFDLLPIPTAAGGISHSKLTYGKTTQGSPLPNINLGMKISLLDLQIATENFDTKRIIGKGGFGNVYKGVLKNGMNVAVKRSVPGSGQGRHEFQTEIMVLSKIRHIHLVSLIAYCDERCEMILVYEYMENGTLRDNLYDTNLPCLTWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSYVSTCVKGTFGYLDPDYFRSQQLTEKSDVYSFGVVLLEVLCARPAIELSCPSEQVNLAEWGLHCKDKGILEEIVDPSIKAQINQNSLRIFSETVEKCLHDYGCDRPTMVDVLWDLEYALQLQREPHEDSSSSAFASLQLPNVQHLPSLSTPTEVDGTSTGRIDESESATLMMLDRLSCEANQGTTINTQMSPMEELFL* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3407 851 SUPERFAMILY Protein kinase-like (PK-like) 485 768 IPR011009 -
Mtr4g3407 851 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Mtr4g3407 851 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3407 851 PANTHER BNAC03G27170D PROTEIN 24 798 - -
Mtr4g3407 851 Gene3D - 28 181 - -
Mtr4g3407 851 Gene3D - 216 394 - -
Mtr4g3407 851 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Mtr4g3407 851 PANTHER OS07G0166700 PROTEIN 24 798 IPR045272 GO:0004714|GO:0006468
Mtr4g3407 851 CDD STKc_IRAK 504 769 - -
Mtr4g3407 851 Gene3D Phosphorylase Kinase; domain 1 464 573 - -
Mtr4g3407 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mtr4g3407 851 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3407 851 Pfam Malectin-like domain 48 394 IPR024788 -
Mtr4g3407 851 Pfam Protein tyrosine and serine/threonine kinase 500 764 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3407 Mtr-Chr4 47506273 47509444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3407 27 803 Receptor kinase-like Gene Family AT2G23200 42.590 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr4g3407 Malectin_like 3.4e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3407 - - mtr:MTR_4g095032 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3407 4 47506273 47509444 Mtr4g3407 4 47506273 47509444 ECH