Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3405 ATGAATAGCAATCATCAATTTCATAACTTAAAAAAAATCATCAAACAAACACAATTTTCCTCTCTCACCATGTCAACCTTTCACTTCCACACAATTCAACGCTCTATCTTTCTCCTTGCTTTTTTTCTTCAATTCTCATCATTACAATTCCCCTCACTCGGATACGATCCTCAAGACACATACTTCATCAATTGTGGATCAGATATCGACGTGAATGAAAATAACAACCTTTATATTGGTGAATCAAACCATGCTTACCCGAAAAAATTATTCAGCGAAAGTAACTCCAAAGTAACAAGTCAATCACCAGTGTCTTCACCTCTCAACCAAACAGCAAGAATTTTCCTTTCCAATTCTTCCTATGAATTCAAAACCGTTCCAAGCAACACTTACATGGTACGTTTCCATTTCTTTTCATTCTCTTCACCAACTAACCTTTCCTCTGCAAAATTCACCGTTTCAGTTCCTGGTTTCCTTCTGTTACATAATTTCAACGCTGAAAACACCACCAACTCTCCTTTAGTAAAAGAGTATTACGTTAAAATCATCAGAAAAAGATTCACAATCACTTTCACACCTCAAACATCATCATTTGCGTTTGTTAATGCAATTGAACTCTTTATGCTCCCTCTTCATTTAATCCCCGATTCAGTAGCACGTTTCAATTACATCGGTTCTACTGGTCGGGGCTTAACTACTTATAGTGGCGGTTTACACTCACAACGATCGTTGGAAACCAAACTCCGTCTTAACGTCGGTGACCAAACTGTCGATAGAGGAACCGATACATTATCGAGAGAATGGTTAGCAGATGACAGTTATGTAACTAATCCACAAAACGCTAAGAATCGCTCCTTTGACGTTCATATTCCACGCACTGCAAATGATACATCTGATGGTCCAAATTCAAATCAATATATTGCTCCAGACAGGGTTTATCAAACTGGCAAAGAGAGTATTAACGGTTCTAGCAACATAAGTTGGAGTGTTCCTGTAGAGAAGAACGTAGATCATTTACTTAGGTTTCATTTCTGTGACGTTTTTAGTAATCGACAGTCTGGTCTGACAGATTTCCTTCTCTTAATTTATGACACTTATGTTGTGAATGTCAATAATGACACAAGTTTGTCACTACAGATGCCTTATTATTATGATTTTGTGGTTCAATCCGATGCCTCTGGGAACCTGAATGTTACCGTACAACCTAATGTGTCGGATTTTGTACCGAATGCATTTTTAAATGGGCTAGAACTAATGGAAGTGATTGAACAATCTAGTGAAATTCCCCCGGATGATATGGATTCGAAGGTTAGTCTTCCTGTGGTGGTGGGTTCGGTTGTTGGAGGTTTAGTTTTGGTTTTGGTTGTGGTGGTTTTGTTTCTTTGGATTAGTAAAATCAGGAAACAAAGGCCTGTTGAAAATTCCGAATGGTTGCCAATTCCAGCTGCCAGAGGAGGGAGTTCTCACAGCAGATTAACTGATGCAACAGCAATTCAAGGCTCCCCTTTACCTAACATAAACCTCGGATTGAAAATCCCCTTGCTTGATCTTCAATTCGCAACGGATAACTTTGATGCAAAGAGGATAATTGGAAAGGGTGGTTTTGGAATTGTTTATAAGGGAGTTCTCAGGAATGGAGTTAGTGTTGCAGTGAAAAGAAGTGAGCCAGGGTCAGGTCAAGGACTACCTGAATTTCAGACTGAGATAATGGTTTTGTCAAAGATTCGTCATCGACACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGGTATGAGATGATACTTGTTTATGAGTACATGGAAAAGGGGACACTTAAAGATAGTTTGTATGGTGCAAATTTGCCTAGTTTCTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGCAGCTGGTGGAATCATTCACCGCGATGTGAAGTCCACTAACATATTGCTTGATGAGCATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAACTGGTCCTCTTGATCAGCATTCTTATGTCAGCACAGGTGTTAAGGGAACTTTCGGTTATCTCGATCCTGAGTACTTTAGATCACAACAGCTTACAGAAAAATCTGATGTGTATTCATTCGGCGTGGTTCTACTTGAAGTTTTGTGTGCAAGACCAGCCATTGAACCGTCCCTTCCAAGGGAACAAGTGAACTTAGCTCAGTGGGGAATTTTTTGCAAAGACAAAGGGCTATTGGAAGATATCATTGATCCTTCCATCAAGGGACAAATTGATCCAAACTCACTTAGAAAGTTTAGTGAGATAGTGGAAAAGTGCTTACAAGATGATGGTTGTGATAGGCCTTCAATGGGCAATGTTTTGTGGGACTTGGAATATTCTTTGCAGCTTCAGAGAGGTGCAGTACATAGAGAACCTCATGAGGATAGTTCTATCAGTGCTTCTGTATCAATTCAATTGCCCAATGTTCGCCGTTTACCTTCTCTGAATACACTGAGTGAAGTGGATGATATGTCTATGTCTATTTTGAGGGTTATTGATGAATCTGATAGTGCTGGGCATTCTGTTTTCTCTGAGTTGAACCTTGATGATGCCAGATAG 2613 0.3949 MNSNHQFHNLKKIIKQTQFSSLTMSTFHFHTIQRSIFLLAFFLQFSSLQFPSLGYDPQDTYFINCGSDIDVNENNNLYIGESNHAYPKKLFSESNSKVTSQSPVSSPLNQTARIFLSNSSYEFKTVPSNTYMVRFHFFSFSSPTNLSSAKFTVSVPGFLLLHNFNAENTTNSPLVKEYYVKIIRKRFTITFTPQTSSFAFVNAIELFMLPLHLIPDSVARFNYIGSTGRGLTTYSGGLHSQRSLETKLRLNVGDQTVDRGTDTLSREWLADDSYVTNPQNAKNRSFDVHIPRTANDTSDGPNSNQYIAPDRVYQTGKESINGSSNISWSVPVEKNVDHLLRFHFCDVFSNRQSGLTDFLLLIYDTYVVNVNNDTSLSLQMPYYYDFVVQSDASGNLNVTVQPNVSDFVPNAFLNGLELMEVIEQSSEIPPDDMDSKVSLPVVVGSVVGGLVLVLVVVVLFLWISKIRKQRPVENSEWLPIPAARGGSSHSRLTDATAIQGSPLPNINLGLKIPLLDLQFATDNFDAKRIIGKGGFGIVYKGVLRNGVSVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLKDSLYGANLPSFLTWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDEHLVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPSLPREQVNLAQWGIFCKDKGLLEDIIDPSIKGQIDPNSLRKFSEIVEKCLQDDGCDRPSMGNVLWDLEYSLQLQRGAVHREPHEDSSISASVSIQLPNVRRLPSLNTLSEVDDMSMSILRVIDESDSAGHSVFSELNLDDAR* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3405 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mtr4g3405 870 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Mtr4g3405 870 SUPERFAMILY Protein kinase-like (PK-like) 512 793 IPR011009 -
Mtr4g3405 870 SMART serkin_6 524 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3405 870 Pfam Malectin-like domain 63 421 IPR024788 -
Mtr4g3405 870 CDD STKc_IRAK 530 796 - -
Mtr4g3405 870 Gene3D - 58 208 - -
Mtr4g3405 870 Gene3D - 243 422 - -
Mtr4g3405 870 ProSiteProfiles Protein kinase domain profile. 524 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3405 870 Gene3D Transferase(Phosphotransferase) domain 1 600 818 - -
Mtr4g3405 870 PANTHER BNAC03G27170D PROTEIN 52 828 - -
Mtr4g3405 870 Pfam Protein tyrosine and serine/threonine kinase 527 792 IPR001245 GO:0004672|GO:0006468
Mtr4g3405 870 Gene3D Phosphorylase Kinase; domain 1 489 599 - -
Mtr4g3405 870 PANTHER OS07G0166700 PROTEIN 52 828 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3405 Mtr-Chr4 47454595 47464795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3405 55 870 Receptor kinase-like Gene Family AT2G23200 44.988 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr4g3405 Malectin_like 1.8e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3405 - - mtr:MTR_4g095012 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3405 4 47454595 47464795 Mtr4g3405 4 47454595 47464795 ECH