Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3396 ATGAAAACAACACTTTCTCTTCTTCTCACACTCCTATCTTTAACCCTAACCCTAAACCAATGTTTTTCACTCACTAACGATGGTGTTTTGTTACTTTCTTTCAAATATGCTGTTCTTAACGACCCTTTATTGGTGCTCTCAAATTGGAATTACAGCGACCAAACACCATGTTCATGGAACGGTGTTTCTTGTTCCATAATAACACCAAACACAAACAATGATACACCGTTTCGTGTTACTGGTTTATCACTACCAAATTCTCAGCTTGTTAGTTCAATTCCTTCTGATCTTGGTACCATTGAACACCTTCAAATTCTTGATCTTTCTAATAATTCCATTAATGGGTCTCTTTCTTCAAACTTTTTTCAGCCAAATTCTGAGCTATGTTTTCTTAATTTTTCGAACAATTTGTTAACAGGTGAAGTTCCAGAGTCTTTAACAGAGCTTAGAAATCTTCAGTTTCTTAACTTTTCAGACAATGCTTTCACTGGAAAACTACCAAACAACCTCTCAAACATGCAAAACTTAACCGTAGCTTCGTTTAAGAACAATTACTTCACTGGTTTTCTTCCTAAAGATTTACGAACTTTACAAATTTTGGATCTGTCTTCAAATTTGTTAAACGGGTCATTAACTCAAGATTTTGGCGGTGATTCCTTGCGTTACTTGAATGTTTCCTACAACAGATTTTCCGGTGAAATTCCACGGGAATTCGCCGAGAAAATTCCCAGTAACGCAACCGTTGATCTATCATTCAACAATCTCACTGGCGAAATACCGGAGTCCCCTGTTTTGTTGAACCAGGAAACAAAAGTGTTTTCTGGTAATAGTGATCTATGTGGTGAACCAATGAAAAATCCTTGTTCTATTCCTTCTTCTCCTTCTTCTAATCCTCAAGGTTCTTCTCCTCCTGCACTCGCCGCAATGCCGAAGAATTTTGATAATGATTCTCCTCAATCACAAACAACAGAGTCTTCAGAGAAGAAACAGAGTGGTTTGAGAAAAGGAACTATTATAGGAATTGTTATTGGTGATTTCGTTGGAATTGGAATCTTAGCTATGGTTTTTGTTTATGTTTATAAGCTAAAGAGAAAAAAAGATGCGGAAAATGCAATAAAAAATGAAGTTGCTACTGCAAGAAGTGAGAATTCTTCATCAACCTTAGAGACAAAAGGGTTTACAAGGTGGTCTTGTTTAAGAAAAAGAACAGAAGATGAAGAATCCTCGGAGACACAAAGTTCTTCAGATAGTGACGTGGAAATATCACAAAAAAATGTTGATGCTGAGAATCAAAAGCAAGGTGAGAATAAAGCTGGTACGGGTTCGGGTACAGGCACTCTGGTCATAGTTGATGGTGAAAGAGAGCTTGAAGTGGAAACACTTTTGAAAGCTTCTGCGTATATTTTAGGAGCTACTGGTTCAAGTATAATGTATAAAGCTGTTCTTGAAGATGGAACTTCTTTAGCAGTTCGTAGAATTGGTGAAAATGGTGTTGAAAGGTTCAAGGATTTTGAGAATCAAGTTCGGGTTATAGCTAAATTAGTTCATCCAAATTTAGTTAGGGTTCGTGGATTTTACTGGGGACATGAAGAAAAACTCATTATCTATGATTTTGTTCCTAATGGTTGTCTTGCCAACGTTCGTTACAGGAAGGTGGGGTCCTCACCTAGCCACTTACCGTGGGAAATACGGCTCAAGATAGCAAAAGGTGTGGCACGTGGGCTGACTTATCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCTACCAATATTCTATTGGGCAATGATATGGAGCCCAAAATTGGAGACTTTGGGCTTGAAAGAATAGTAACAGGTGACACAAGTTATAGTAAAGCAGGAGGTTCAGCACGTATTTTTGGAAGTAAAAGATCATCAGCCTCACGTGATAGTTTTCAAGATCTTACATGTGGGCCTAGCCCAAGCCCAAGCCCAAGTTCCATAGGTGGTGTGTCACCTTATCATGCTCCTGAATCACTTAGGAATTTGAAACCTCACCCAAAATGGGATGTGTACTCTTTTGGGGTCATGTTTCTTGAACTATTAACGGGGAAGATTGTGGTTCTTGATGATATGGGCCAAGGCCCAGCGGTTTTGGTTGAGGATAAGAATCGAGCTTTGAGGATGGTTGATGTGGCGATTCGTGCTGACATGGAAGGTAAGGAGGATGCTTTGTTGGCTTATTTTAAGTTAGGGTATAGTTGTGTGACTAATGTACCTCAAAAAAGGCCACAAATGAAAGAGGTGTTACAAGTTCTTGAAAAAACACCATCTACGATTTCTTCATCGTATTATTATAGCCATTGA 2331 0.3874 MKTTLSLLLTLLSLTLTLNQCFSLTNDGVLLLSFKYAVLNDPLLVLSNWNYSDQTPCSWNGVSCSIITPNTNNDTPFRVTGLSLPNSQLVSSIPSDLGTIEHLQILDLSNNSINGSLSSNFFQPNSELCFLNFSNNLLTGEVPESLTELRNLQFLNFSDNAFTGKLPNNLSNMQNLTVASFKNNYFTGFLPKDLRTLQILDLSSNLLNGSLTQDFGGDSLRYLNVSYNRFSGEIPREFAEKIPSNATVDLSFNNLTGEIPESPVLLNQETKVFSGNSDLCGEPMKNPCSIPSSPSSNPQGSSPPALAAMPKNFDNDSPQSQTTESSEKKQSGLRKGTIIGIVIGDFVGIGILAMVFVYVYKLKRKKDAENAIKNEVATARSENSSSTLETKGFTRWSCLRKRTEDEESSETQSSSDSDVEISQKNVDAENQKQGENKAGTGSGTGTLVIVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGENGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHEEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYSKAGGSARIFGSKRSSASRDSFQDLTCGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPAVLVEDKNRALRMVDVAIRADMEGKEDALLAYFKLGYSCVTNVPQKRPQMKEVLQVLEKTPSTISSSYYYSH* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3396 776 SUPERFAMILY Protein kinase-like (PK-like) 468 765 IPR011009 -
Mtr4g3396 776 Gene3D Ribonuclease Inhibitor 193 290 IPR032675 -
Mtr4g3396 776 Coils Coil 362 382 - -
Mtr4g3396 776 Gene3D Transferase(Phosphotransferase) domain 1 540 772 - -
Mtr4g3396 776 PANTHER BNACNNG22430D PROTEIN 9 774 - -
Mtr4g3396 776 PANTHER OS05G0588300 PROTEIN 9 774 - -
Mtr4g3396 776 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mtr4g3396 776 Pfam Leucine Rich Repeat 219 238 IPR001611 GO:0005515
Mtr4g3396 776 Pfam Leucine Rich Repeat 102 123 IPR001611 GO:0005515
Mtr4g3396 776 Gene3D Phosphorylase Kinase; domain 1 449 538 - -
Mtr4g3396 776 MobiDBLite consensus disorder prediction 638 657 - -
Mtr4g3396 776 MobiDBLite consensus disorder prediction 283 331 - -
Mtr4g3396 776 PRINTS Leucine-rich repeat signature 103 116 - -
Mtr4g3396 776 PRINTS Leucine-rich repeat signature 194 207 - -
Mtr4g3396 776 ProSiteProfiles Protein kinase domain profile. 463 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3396 776 MobiDBLite consensus disorder prediction 638 661 - -
Mtr4g3396 776 Gene3D Ribonuclease Inhibitor 25 192 IPR032675 -
Mtr4g3396 776 MobiDBLite consensus disorder prediction 414 443 - -
Mtr4g3396 776 MobiDBLite consensus disorder prediction 288 303 - -
Mtr4g3396 776 Pfam Protein kinase domain 469 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3396 776 MobiDBLite consensus disorder prediction 313 327 - -
Mtr4g3396 776 SUPERFAMILY L domain-like 25 284 - -
Mtr4g3396 776 MobiDBLite consensus disorder prediction 401 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3396 Mtr-Chr4 47341836 47346163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3396 23 776 Receptor kinase-like Gene Family AT4G37250 57.253 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g3396 Pkinase 1.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3396 - - gmx:100784503 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3396 4 47341836 47346163 Mtr4g3396 4 47341836 47346163 ECH