Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3390 ATGGCTGCCAATAATGAAAAGAAAGAGCAAAACATTCATCTCCCTCACGAAACTATCCTTAAGAGTGATGCACTACATCAGTATATACTTGAAACAAGCGTGTTTCCAAGAGAACACCCATGCTTGAAGGAGCTTAGGGAGATGACACTAACACACCCTAAGTATATGATGGCTACACCCGGTGATGAAGGCCAGCTTATCAACATGCTAATTAAGCTCATCAATGCAAAGAACACAATGGAAATTGGTGTCTACACAGGTTACTCTTTGCTCTCCACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTGGACGTGAGTCGTGAATACTATGAACTAGGATTGCCAATAATTGAAAAAGCTAGAGTGGCTCACAAAATTGATTTTAGACAAGGACCTGCTCTCCCTCTACTTGATGAACTTCTTCAAGATGAATATAACAAGGAGACATTTGATTTCGTTTATGTGGATGCTGATAAGGATAACTACATTAACTATCACAAGAGGGTGGTTGAGCTTGTTAAAGTTGGAGGATTGGTTGCATATGACAACACCTTATGGAGTGGTTCTGTTGCGGTTCCATCAGATGCACCGATGACAAGTTACGTTAGGAATTTTCGTGGTCATGTGATTGAGTTTAACAAACATTTAGCCCAGGATTTAAGGATTCAGATCTGTCAACTCTCAGTAGGCGATGGAATTACTCTATGCCGCCGCATCATCTAA 732 0.4112 MAANNEKKEQNIHLPHETILKSDALHQYILETSVFPREHPCLKELREMTLTHPKYMMATPGDEGQLINMLIKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDVSREYYELGLPIIEKARVAHKIDFRQGPALPLLDELLQDEYNKETFDFVYVDADKDNYINYHKRVVELVKVGGLVAYDNTLWSGSVAVPSDAPMTSYVRNFRGHVIEFNKHLAQDLRIQICQLSVGDGITLCRRII* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3390 243 PANTHER O-METHYLTRANSFERASE-RELATED 6 243 - -
Mtr4g3390 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 241 IPR029063 -
Mtr4g3390 243 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 6 243 - -
Mtr4g3390 243 Pfam O-methyltransferase 32 242 IPR002935 GO:0008171
Mtr4g3390 243 Gene3D Vaccinia Virus protein VP39 17 243 IPR029063 -
Mtr4g3390 243 CDD AdoMet_MTases 81 184 - -
Mtr4g3390 243 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 18 242 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3390 Mtr-Chr4 47239350 47241742 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3390 3 242 Monolignol Biosynthesis Gene Families AT4G34050 67.078 8.81e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3390 K00588 - gmx:100305498 366.696