Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3386 ATGGCCGTGGAGCTCATGACAGGCTACAACAGAAACCAATCTTTCACTACCAAAGCAGAAGAAAATGCTGTCCAAGAAGCAGCTTCTGGTTTAGAAAGTGTTGAAAAACTCATAAAACTTCTCTCAGAAGCACGTCACAAATACCAACCTTCTTCATCTTCTTCCTCTTCCTTTTCACCTTCAAACCCTAACAACAATAACAACAACCCTACTATGGATATAGAAAGAGATTGCAAAGCTGTTGCAGACATAGCTGTTTCCAAGTTCAAACGTGTTATTTCACTGCTTGAAAAAACTAGAACTGGTCATGCTCGTTTCAGAAAAGCTCCTTTACCACAACCACAACCACCACCATCACAAACCCTACAATTTCAACCTTCTGAACCAATGATTTTCAACGCTACACCTTTGCAACAGATTCCACCAACTGTTTCTACTACCCTTCACCGTCCTATAATCAAGAGAAATGATTCTTCAAAAACTCTTAATTTTTCATACTCTTCTGCTGGTAATTCTTTCATTTCTTCACTCACTGGCGACGACAACAACAAACAACCGTCGATGTCGTCTCCGGCGGGTGCTTTTCAGATTACAAATCTGTCTCATGTTTCATCTGTTGGTAAGCCACCACTCTCTTCTTCTTCATTGAAAAGGAAGTGTAGCTCTGAAACTTTGGGTTCTGGAAAGTGTGGTAGTTCTTCTAGCCGTTGTCATTGTTCCAAAAAAAGTAGGAAAATGAGATTGAAGAGAGTTGTTCGGGTTCCTGCAATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGTAGCAGTGTGAGAGGGTGTCCAGCAAGAAAGCATGTAGAGAGAGCTCTTGATGATGCTTCTATGCTGGTAGTTACCTATGAAGGAGAGCACAATCACTCTCTTTCTGCAGCTGATGCTAGCAATCTCATTTTAGAATCATCATAG 1017 0.4081 MAVELMTGYNRNQSFTTKAEENAVQEAASGLESVEKLIKLLSEARHKYQPSSSSSSSFSPSNPNNNNNNPTMDIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQPQPPPSQTLQFQPSEPMIFNATPLQQIPPTVSTTLHRPIIKRNDSSKTLNFSYSSAGNSFISSLTGDDNNKQPSMSSPAGAFQITNLSHVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADASNLILESS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3386 338 Gene3D WRKY domain 252 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g3386 338 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 338 IPR044810 GO:0003700
Mtr4g3386 338 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g3386 338 MobiDBLite consensus disorder prediction 46 73 - -
Mtr4g3386 338 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 16 338 - -
Mtr4g3386 338 Pfam WRKY DNA -binding domain 267 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g3386 338 SUPERFAMILY WRKY DNA-binding domain 262 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g3386 338 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g3386 338 MobiDBLite consensus disorder prediction 45 73 - -
Mtr4g3386 338 Pfam Plant zinc cluster domain 217 263 IPR018872 -
Mtr4g3386 338 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3386 Mtr-Chr4 47203789 47205564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3386 20 323 WRKY Transcription Factor Family AT2G24570 44.242 4.91e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g3386 WRKY 9.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3386 - - gmx:100170685 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3386 4 47203789 47205564 Mtr4g3386 4 47203789 47205564 ECH
Mtr4g3386 4 47203789 47205564 Mtr5g0618 5 5986582 5988635 PCT