Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3381 ATGCCTCGTTTAATAACACCCTTCTTCCCTCTCTTCTTTTTCTTCACATTAGCTTCCTCTACCAACTCTACACTATCACAAGACGCAGTATCTTTACTATCGTTTAAACAAAACGCAGACCAAAACAACAAACTACTCTATACAATAAACGAACCTTATGATTACTGCGAATGGCAAGGAGTCAAATGTGCACAAGGCAGAGTAGTACGCTACGTTGTTCAATCGTTAAACCTCACCGGTTTTTTCTCACCAAACACGTTAACCCGGCTCGACCAACTCCGAGTCATGAGCCTCCGTAACAACTCGCTCTCTGGACCTATTCCAGATCTTTCTCCACTTACAAACCTCAAATCACTCTTCCTCGACCGGAATAATTTCTCCGGTTCATTCCCTCCTTCCATTCTCTTCCTCCATAGACTCATCACTCTTTCACTCTCTCATAACAACCTCACTGGTTCACTTCCGGTTCAGTTAACTCTCCTCGACCGTCTTATTATTCTCCGCCTCGACTCTAACTCATTCACCGGTTCTCTTCCTTCTTTTAACCAAACTGATTTAAAAGTTTTTAACATCTCCGCTAATAACCTCACCGGTCCGGTTCCTGTTACGAAAACTCTTTCACGGTTTAAACCGGCTTTGTTTTCAGATAACCCGGGTTTATGTGGTGAGATTATTCATAAACAATGCGGTCATCGTTCTAGATTCTTTGGTGGTTCTTCAAACGCCACCGCGCCGTTGAGTCAAAGCGAGGAATCGCAGGGAATCGTGGTGGTTCCTTCTTCAAAGAGAAACAAAAACCACAAAAAAACCGGTTTGGTTATCGGGTTCATAGTTGCTGGTTTTATATTTCTAGCTGTTTCTACTATTATTGTAATTGCATTGGTTAAAAAGCAGAACACCGGAGAAAAATCAGAGTCACCGGAAAATTTACAGTCTTCTACTTCACCGGCAATGGAGGTATTGGAAGTGAGAACGGAAAATGATACGAAAGTGAAGAAAATGGAAGAAGCGCACAAGAGTGGGAAGTTAGTGTTCTGCTGTGGTGAAGTGCAGGAGTATACACTGGAGCAGCTGATGAGAGCTTCTGCTGAGCTTTTAGGAAGAGGGAATGTGGGGGCGACGTACAAGGCGGTGATGGATTCACGGTTGATTTTGACTGTGAAGAGGTTGGATGCCGAAAAAACTGGTGGGACGAGTGGGGAGGATTTTCAGAAGCATATGGAGATGGTGGGGAGGCTTTGTCATCCCAATTTGGTTCCTTTGAAGGCATTTTTTCAGGCTAAGGGAGAGAGGCTTGTTATCTATGAGTATCAACCTAATGGAAGCCTCTTCAATCTTGTTCATGGTTCAAGATCGGCTAGAGCGAAGCCCTTGCATTGGACATCATGCTTAAAAATTGCGGAAGATGTAGCCCATGGACTTGCGTATATTCATCAAGTTTCCTCTCTGGTTCATGGCAATTTAAAATCCTCTAACGTCCTTCTTGGCGAGGACTTTGAAGCTTGTGTTACGGACTATTGTTTAGCCTTCCTTACAGATTCTTCATCGACAGAAGATCCTGATTCTGCAGCCTATAAAGCACCAGAGGTTCGAAAATCTAACCGAAGGGCGACTTCAAAGTCTGATGTGTATGCTTTTGGTGTGTTATTGTTGGAGCTTTTGACAGGTAAACATCCTTCCAAACATCCTTTCCTTGCGCCAGCAGATTTGCAAGATTGGGTTAGGGCAATGAGGGACGATGATTTTAGCGAAGATAACCGGCTAGAAATGCTCACCGAGGTTGCCAGTATTTGCAGTGCAACCTCCCCAGAGCAGAGGCCAGCTATGTGGCAAGTCCTTAAGATGATACAAGGAATAAAGGATAGTGTTTCAATGGAGGAGACTGAACTCACTGGACTCTCATAG 1905 0.4399 MPRLITPFFPLFFFFTLASSTNSTLSQDAVSLLSFKQNADQNNKLLYTINEPYDYCEWQGVKCAQGRVVRYVVQSLNLTGFFSPNTLTRLDQLRVMSLRNNSLSGPIPDLSPLTNLKSLFLDRNNFSGSFPPSILFLHRLITLSLSHNNLTGSLPVQLTLLDRLIILRLDSNSFTGSLPSFNQTDLKVFNISANNLTGPVPVTKTLSRFKPALFSDNPGLCGEIIHKQCGHRSRFFGGSSNATAPLSQSEESQGIVVVPSSKRNKNHKKTGLVIGFIVAGFIFLAVSTIIVIALVKKQNTGEKSESPENLQSSTSPAMEVLEVRTENDTKVKKMEEAHKSGKLVFCCGEVQEYTLEQLMRASAELLGRGNVGATYKAVMDSRLILTVKRLDAEKTGGTSGEDFQKHMEMVGRLCHPNLVPLKAFFQAKGERLVIYEYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLVHGNLKSSNVLLGEDFEACVTDYCLAFLTDSSSTEDPDSAAYKAPEVRKSNRRATSKSDVYAFGVLLLELLTGKHPSKHPFLAPADLQDWVRAMRDDDFSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEETELTGLS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3381 634 SMART serkin_6 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3381 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 630 - -
Mtr4g3381 634 SUPERFAMILY Protein kinase-like (PK-like) 364 623 IPR011009 -
Mtr4g3381 634 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Mtr4g3381 634 Gene3D Ribonuclease Inhibitor 183 232 IPR032675 -
Mtr4g3381 634 PANTHER LRR RECEPTOR-LIKE KINASE 5 630 - -
Mtr4g3381 634 Pfam Protein kinase domain 363 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3381 634 Gene3D Phosphorylase Kinase; domain 1 324 437 - -
Mtr4g3381 634 ProSiteProfiles Protein kinase domain profile. 360 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3381 634 SUPERFAMILY L domain-like 26 222 - -
Mtr4g3381 634 Gene3D Transferase(Phosphotransferase) domain 1 439 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3381 Mtr-Chr4 47157816 47161845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3381 3 627 Receptor kinase-like Gene Family AT3G50230 52.535 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g3381 Pkinase 7.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3381 - - gmx:100783086 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3381 4 47157816 47161845 Mtr4g3381 4 47157816 47161845 ECH