Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3376 ATGGCTTTCACAATTTCATATTTTTTCCTAGCCTACTTGTTATTTCCCTTCCAATGTTCATCTTCATTATCATCATTGAACAAAGGGTCCTCTCTTTCAGTAGAGAAGTATGCTGAAGATGTAATTGTTTCTTCAAATGGAATGTTCTCAGCTGGCTTCTTTCAAGTTGGTGAAAATGCTTTTTCCTTTGGAATATGGTTCACTGAACTGCAGCCTCACACTCACAACCCCGCCACTATTGTTTGGATAGCAAACCGTGACAACCCTGTAAATGGTAAGCTCTCAAAGCTTTCCCTCTTAAACACAGGTAATATCCTTTTGCTTGATGCCGGTCAAAACAACATTTGGTCTTCAAACACAGAATCAAACACTCCACTAGAGTTGTATCTAAAAGAAGATGGCAATCTTGTGTTACGTGAGCTTCAAGGTACTACGATCTTGTGGCAAAGCTATGATTTTCCAACAAATACTCTCCTTCCTAATCAACCTCTCACTAGATACACAAAACTTGGTTCCTCAAGAAGTCAGAGTAATCATTCTTCTGGCTTCTATAAGTTGTTTTTTGATGATAACAATATTATTCGTCTAGAATATGATGGTCCTGATGTTTCAAGCACATATTGGCCACCACCATGGTTGTTAAGTTGGCAAGCTGGAAGGTTCAATTATAATAGTAGTAGAATTGCTTTGTTGGATTCTCATGGAAAGTTTATTTCATCTGATAATTACATTTTTTCCACATATGATTACGGTACGGTTATGCAAAGAAGATTAACCATGGATTCTGATGGTAATATTCGTGTTTACAGTCGAAAAAGTTTGTTAGAAAATTGGTATGTTTCATGGCAAGTCATATATGATACATGCACCATTCATGGAATTTGTGGTGAAAATAGCACTTGTAGCTATCATCCGAAAAAGGGTAAGAAGTGTTCTTGTTTGCAAGGATATAAAGTGAAGAACCATAATGATTGGTCTTATGGTTGTGAGCCTATGTTTGATTTTACTTGCAATAGAAGTCATTCTACCTTTTTAAAATTACCAGGTTTTGAGCTTTATGGTTATGACATTAATTTTGTTGAAAATAGTACCTACAAAAATTGCGAGACTTTATGTTTGCAAGATTGTAACTGCAAAGGATTCCAACACACATTTGAAAGGGACCAAGGCATCTTCAAATGCTATACAAAGCTAAATTTGTTGAATGGGAGGTATTCACCAAGTTTTCGAGGAACAACTTACTTGAGACTTCCAAAAGGTAATAACTTCACTAAACAAGAGTCTATGAGTGTAGAAGACCGTGTTTGTTTGGTCCAAATTCACAAAGACTATGCCAAAAAACCAATAAACAATACGGTGAAGTTTTTCCTTTGGCTTTCAATTGCAATTGGTTGTTTTGAATTAGTTTGCTTTTTTGTGGTTTTTGTTTTTTTATTCAAGACCACGAAAAAAACTACTTCGGATCAAAATAGCTATCATCATACATTATTGGGATTCAGAAGATACAGTTACTCGGAGTTGAAGGTGGCAACCAAGAATTTCAGTAATGAGATTGGAAAAGGCGGAGGAGGGGTTGTATACCTAGGTACATTGCCGGATCAAAGACAAGCAGCAATAAAGAGATTGAATGAAGCTAATCAAGGGGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATCGGAAGGCTCAATCACATGAACTTAATTGAAATGTGGGGATATTGTGTTGAAGGTAAGCATAGAATTTTGGTATATGAGTACATGAAGAATGACTCTTTAGCTGAAAATCTTTCATCTAAAACTAACATGCTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAACAGCTAGAGTCCTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGTGATATAAAGCCTCAAAATATACTTCTTGATTCTAACTATCAACCCAAGTTAGCAGACTTTGGATTGTCTAAGCTGAGAAATAGAAACAATGTCAATAGTAATTCAGAATTCTCAATGATTAGAGGAACAAGAGGATATATGGCTCCTGAATGGGTTTTCAATTTACCAATAACATCTAAAGTGGATGTTTATAGTTATGGGATTGTTTTGTTGGAGATGATAACTGGAAAAAGATCAACAATGATGAATATTGAAGGAGTTGATGGAGAAGTGGCATATAATGGAAGGTTGGTAACTTGGGTAAGAGAGAAAAAAAGGAGTGCATGTTGGGTGGAAGAAATTATGGATCCTTCAATAGTGATTAATTGTGATTTAATTAAGATGGAAATTTTGGCTAAAGTTGCTTTGGAGTGTGTAGAGGAAGATAGAGATATTAGGCCTAATATGAGCCAGGTGGTTGAGATGCTTGAAAGTAATCAAAGACTTGTTGAGTGA 2394 0.3571 MAFTISYFFLAYLLFPFQCSSSLSSLNKGSSLSVEKYAEDVIVSSNGMFSAGFFQVGENAFSFGIWFTELQPHTHNPATIVWIANRDNPVNGKLSKLSLLNTGNILLLDAGQNNIWSSNTESNTPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLGSSRSQSNHSSGFYKLFFDDNNIIRLEYDGPDVSSTYWPPPWLLSWQAGRFNYNSSRIALLDSHGKFISSDNYIFSTYDYGTVMQRRLTMDSDGNIRVYSRKSLLENWYVSWQVIYDTCTIHGICGENSTCSYHPKKGKKCSCLQGYKVKNHNDWSYGCEPMFDFTCNRSHSTFLKLPGFELYGYDINFVENSTYKNCETLCLQDCNCKGFQHTFERDQGIFKCYTKLNLLNGRYSPSFRGTTYLRLPKGNNFTKQESMSVEDRVCLVQIHKDYAKKPINNTVKFFLWLSIAIGCFELVCFFVVFVFLFKTTKKTTSDQNSYHHTLLGFRRYSYSELKVATKNFSNEIGKGGGGVVYLGTLPDQRQAAIKRLNEANQGEGEFLAEVSIIGRLNHMNLIEMWGYCVEGKHRILVYEYMKNDSLAENLSSKTNMLDWSKRYDIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKLADFGLSKLRNRNNVNSNSEFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGKRSTMMNIEGVDGEVAYNGRLVTWVREKKRSACWVEEIMDPSIVINCDLIKMEILAKVALECVEEDRDIRPNMSQVVEMLESNQRLVE* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3376 797 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Mtr4g3376 797 ProSiteProfiles Protein kinase domain profile. 512 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3376 797 CDD PAN_AP_plant 336 418 - -
Mtr4g3376 797 Pfam D-mannose binding lectin 79 173 IPR001480 -
Mtr4g3376 797 Gene3D - 20 152 IPR036426 -
Mtr4g3376 797 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Mtr4g3376 797 CDD STKc_IRAK 518 790 - -
Mtr4g3376 797 Gene3D Phosphorylase Kinase; domain 1 476 586 - -
Mtr4g3376 797 Pfam S-locus glycoprotein domain 229 320 IPR000858 GO:0048544
Mtr4g3376 797 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Mtr4g3376 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 209 IPR036426 -
Mtr4g3376 797 ProSiteProfiles Bulb-type lectin domain profile. 17 151 IPR001480 -
Mtr4g3376 797 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 794 - -
Mtr4g3376 797 SMART blect_4 33 154 IPR001480 -
Mtr4g3376 797 Pfam PAN-like domain 337 397 IPR003609 -
Mtr4g3376 797 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 794 - -
Mtr4g3376 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Mtr4g3376 797 Gene3D - 153 280 IPR036426 -
Mtr4g3376 797 SMART serkin_6 512 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3376 797 CDD B_lectin 42 154 IPR001480 -
Mtr4g3376 797 Pfam Protein kinase domain 515 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3376 797 Gene3D Transferase(Phosphotransferase) domain 1 587 796 - -
Mtr4g3376 797 PIRSF SRK 1 797 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3376 Mtr-Chr4 47060087 47081727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3376 459 795 Receptor kinase-like Gene Family AT1G56120 38.439 6.83e-62 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g3376 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3376 - - gmx:100784287 1125.92