Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3374 ATGGCATCCATCAAACTCATATCAACCACTACAATTCAAGCACCAAGTCACATTAACACCAACTCAAAAAAAATCCATTTGACCCCATGGGACCTCTCATCCCTCCAAGTTGAAATGAACCAAAAAGGACTTCTCTTTCACAATCACCAAAACCCAAAAGACACCTCAAACCAAATCCAACACCTCAAAAACACCCTTTCCTCAACTCTTGTTTTCTTCCCACCCCTCACCGGTCGTCTCATCATTGAACATCAAGAAGACGACGACAATAGCATCAACGATGACACAACCTCATGTTTCATCCTTTGTAACAACCTAGGTGCGTTATTTATTCATGCAGCAGCTGAAAACACAAGTGTCTTCGATATTGTTAAACCAAACTATGTTCCTTCCATTGTTCACTCTTTTTTTCCATTTAATAAAGTAAAAAACTACGAAGGCACATCAAAACCATTGCTTGCAGTTCAAGTTACTGAGCTTGTTGATGGTATTTTCATTGGCTTCTCAATCAATCATGTTGTTGTCGATGGTAAGTCGTTTTGGCATTTCATCAATTCATGGTCTGAAATTTCGCGTGGTTTTGATCAACTATCGAAACTCCCAACACTTAATCGTTGGTTTCTCGATGAATCAATTGAAATTCCTATAAAATTTCCTTTCACAAAGGAGGAAAATGGAAAAAGTACCGAAATTGATGAAAACCCTGTTCCACTGGAGAGGATTTTCCATTTTACAAAGGAGAAAATTGCGAAACTCAAATCAAAAGCTAACGAAGAGGCCAATATAAACAAAATATCTTCTTTACAAGCACTTTTAACTCACCTTTGGCAAGCTGTGATTCGTGGTCAGAATATCGATCCAGAAGAAGAAATCATGTATTGTTTAGTCATTGATGTTAGAGGCAGAATTATTCCACCTTTGCACGAGAATTACTTTGGAAATGCATTGCAGGTTGGTGGTGTGAAAATGAAAGCAAAGGAATTACTTGCTGAAGGAGCGTTTGGAAAAGTTGCTTTTGAGATGAATAAGATGATAGCTTCACATTGTGATGATACTGTGAAGAGACACTATGAAAGTTGGGTGAAAAATCCAAGGTTGTTTCAAGGCAGGCTTAGTAGTGTTAAGGCTTTGGCAACTAGTAGTTCTCCAAGGTTTGATGTTTATGGTAATGACTTTGGTTGGGGTAAGCCTGTTGCTGTTAGAAGTGGGGGTGCAAATAAAAGTGATGGAACGATAACTATGTTTAGTGGGATAGAAGAAGGTAGTATTGATGTTGAAGTTTGCCTTTCTTATGATATTTTGGAGGCTATGGGAAATGACCCTCAATTCATACATATCTTTTAA 1344 0.3795 MASIKLISTTTIQAPSHINTNSKKIHLTPWDLSSLQVEMNQKGLLFHNHQNPKDTSNQIQHLKNTLSSTLVFFPPLTGRLIIEHQEDDDNSINDDTTSCFILCNNLGALFIHAAAENTSVFDIVKPNYVPSIVHSFFPFNKVKNYEGTSKPLLAVQVTELVDGIFIGFSINHVVVDGKSFWHFINSWSEISRGFDQLSKLPTLNRWFLDESIEIPIKFPFTKEENGKSTEIDENPVPLERIFHFTKEKIAKLKSKANEEANINKISSLQALLTHLWQAVIRGQNIDPEEEIMYCLVIDVRGRIIPPLHENYFGNALQVGGVKMKAKELLAEGAFGKVAFEMNKMIASHCDDTVKRHYESWVKNPRLFQGRLSSVKALATSSSPRFDVYGNDFGWGKPVAVRSGGANKSDGTITMFSGIEEGSIDVEVCLSYDILEAMGNDPQFIHIF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3374 447 Pfam Transferase family 3 440 - -
Mtr4g3374 447 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 445 - -
Mtr4g3374 447 Gene3D - 2 212 IPR023213 -
Mtr4g3374 447 Gene3D - 237 439 IPR023213 -
Mtr4g3374 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3374 Mtr-Chr4 47037505 47038986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3374 60 429 Monolignol Biosynthesis Gene Families AT5G48930 27.937 8.83e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3374 - - gmx:100500257 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3374 4 47037505 47038986 Mtr4g3374 4 47037505 47038986 ECH