Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3373 ATGGCTTCCATCAAAGTGATATCCACAACAACAGTTCAAGCACCAATTGACCACAATAATCTCAACTCAAGAAGTGATTATCGAATAATCGATTTAACACCATGGGATCTCCAATTTCTCTTAGTTGAAACCATTCAAAAAGGCATTCTTTTCCACCAAACCATTCCAAACCAAAACCAAATCAACCATTTGAAACAAACACTTTCCACAACACTTTCCTATTTCCCACCCTTAACAGGCCGTCTTATAATCACCCAACACAATGTGACCACAAACAACAACACATCATGTTCCATCATTTGCAACAACATTGGTGCTCTCTTCATCCACGCCAAAGCGGAAAACACAACCGTATCAGACATCCTTAAACCAAACTATGTTCCTTCTATAGTTCACTCATTTTTCCCACTTAACGGAGTTAAAAACTACGAAGCCACTTCACAACCAATTCTAGGAGTTCAAGTAACGGAGTTAGCTAATGGCATCTTCATTGGTTTGACTCTCAACCACGTTGTTTGTGACGGCAAGATGTTTTGGCATTTCATCAATACTTGGTCACAAATCTCAAAAAACTTCCAGAGTATACCAAAACTCCCTTCATTTCAACGTTGGTTCCCAAACGAAGTTGAACTTCCAATACGCTTTCCTTTCACAAAAACCGAATCACAACGTAGAAAACCTCCGCAGAACTTACCTGAAAGAATTTTCCATTTTACAAAGGAGAAAATTGCGGAACTGAAATCAAAAGCAAATGAAGAAACCAAAACAAAGAATGTTCAAACGAAAATATCTTCGCTTCAAGCGTTGTTATCTCATGTATGGCGATGTGTTGTTCGAAGCAAAAAACTCGATCCAGAAGAAGATTTTCGTTACGTTTTAGTTATAGGTGTTAGACCAAGGATGACTCCTCCACTTGACGAGGATTATTTTGGAAATGCAGGGATCATTGGTAGTGTAACAATGAAAGCAGGGGAGATTCTGGAATGTGGGATAGGAAAATGTTCATTGGAGATGAACAAGATGATTATGTTACGTTCTGATGAGAAAATAAGGGATGATTATGAGTGTTGGTTGAAAATGCCAAAGTTGTTTGGGATTAATAGTTTGGCAGGTGCTAATTCATTGGCTACGAGTAGTTCTCCAAGGTTTGATGTTTATGATAATGATTTTGGTTGGGGGAAGCCTGTAGGGGTTCGAAGCGGGGGTGCGAATAAAAGTAATGGGAAGATTACTGTGTTTGCTGGAGCTGACGAAGGTAGCATTGATATTGAAGTTTGTCTTTCTTATGAGATTTTGGAGGCTTTGGGAAATGATGCTGAGTTCATGGTTCCTAGTTCTACTTAA 1344 0.3891 MASIKVISTTTVQAPIDHNNLNSRSDYRIIDLTPWDLQFLLVETIQKGILFHQTIPNQNQINHLKQTLSTTLSYFPPLTGRLIITQHNVTTNNNTSCSIICNNIGALFIHAKAENTTVSDILKPNYVPSIVHSFFPLNGVKNYEATSQPILGVQVTELANGIFIGLTLNHVVCDGKMFWHFINTWSQISKNFQSIPKLPSFQRWFPNEVELPIRFPFTKTESQRRKPPQNLPERIFHFTKEKIAELKSKANEETKTKNVQTKISSLQALLSHVWRCVVRSKKLDPEEDFRYVLVIGVRPRMTPPLDEDYFGNAGIIGSVTMKAGEILECGIGKCSLEMNKMIMLRSDEKIRDDYECWLKMPKLFGINSLAGANSLATSSSPRFDVYDNDFGWGKPVGVRSGGANKSNGKITVFAGADEGSIDIEVCLSYEILEALGNDAEFMVPSST* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3373 447 Pfam Transferase family 29 442 - -
Mtr4g3373 447 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 443 - -
Mtr4g3373 447 Gene3D - 2 213 IPR023213 -
Mtr4g3373 447 Gene3D - 216 437 IPR023213 -
Mtr4g3373 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3373 Mtr-Chr4 47026890 47029352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3373 64 433 Monolignol Biosynthesis Gene Families AT5G48930 24.873 3.57e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3373 - - gmx:100500257 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3373 4 47026890 47029352 Mtr4g3373 4 47026890 47029352 ECH