Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3372 ATGACAGGGATTCTAGTTATCTCAACTACTACAATCCAAGCAAAAAAACATGTTGATGACAACTCAACTCACACAATTATCGATTTAGCACCATGGGATCTCAAATATCTTAAAATGGCACCAATCCAAAAAGGTCTTCTTTTCCATAAACCCAATACAAACCAAATCGACCATCTTAAACAAACACTTTCCTCCACTCTCAACTTCTTTCCACCACTCGCTGGTCGTCTTGTAATAACACAACACGACGAACCTAACAACGCCTCATGTTCCATCATTTGCAACAACGCTGGTGCATTGTTTGTACACGCCAAAGCTGAACACACTGCCATTGCCGACATCCTTCAGCCAAAGTATGTTCCTCCCATTGTTTCCTCATTATTCTTACTCAACGAAATTCAAAATCACAAAGGCACATCACAACCATTACTTGCAGTACAAGTAACAGAGTTAATCGATGGTATCTTCATTGGTTTTGCAATTAACCATGTGGGTGTAGACGCCAAGTCATTTTGGCATTTCATCAACTCTTGGGCTGAAATCTCACAAGGTTTTAATAAGCCAACAAATATCCCTTCTTTCAAACGTTGGTTTCCAAACAACATTAACCGTCCCATTAGGTTTCCTTTCACAAAGGAAGCACAAAAACAGCCTTTCACGAATGAAGCACAAAATCAACAATGTGAAGTTTTGTCTCATCGAATCTTCCACTTTAGTAAGGAACAAATTCTGCAACTCAAATCAAAAGCTAATGCAGAAATCAGTAGTAGTAATAGTAGTGAGAAAATAATAATATCTTCATTGCAAGCGCTTTTAAGTCACGTTTGGCGTTTAATTATAAGTAAACAAAATCTTAAACCAGAAGAAAGGTCTGCTTTCGTGTTACCCATAGATTGTAGGACAAGAATGTGTCCAAAGTTAGAAGATAATTATTTTGGAAGTGGAATCGGAGCAACTGGATATGTAATAATGCAAGTAGGGGAATTAATGGAAAGTGGGATTGGTAAAATTGCTATGGAAATGAACAAGGTGATATCTATACAATCTCATCATGAGAAGGTAGTGAATAACTATGAGTCTTGGTTGAAAACCCCGTCTATACCGGAGGCAGGTAGATCATCAAGTAATTTGTTGATAGCAAGCAGTTCACCACGGTTCAATTATTACGGCAATGACTTTGGTTGGGGTAAGCCAATTGCAGTTAGAAATGGTGTTGGACTTAAAAGAAATATTGGTAGAGTTATTGTGCTTGGTGGTGAAGAAGAAGGTAGTGTTGATATTCAAGTTTGTCTTCCTTATGATATTTTGGAGGCTATGGGAAATGATCATCTGTCCATGGATCCTATCACTGTCTAA 1356 0.3791 MTGILVISTTTIQAKKHVDDNSTHTIIDLAPWDLKYLKMAPIQKGLLFHKPNTNQIDHLKQTLSSTLNFFPPLAGRLVITQHDEPNNASCSIICNNAGALFVHAKAEHTAIADILQPKYVPPIVSSLFLLNEIQNHKGTSQPLLAVQVTELIDGIFIGFAINHVGVDAKSFWHFINSWAEISQGFNKPTNIPSFKRWFPNNINRPIRFPFTKEAQKQPFTNEAQNQQCEVLSHRIFHFSKEQILQLKSKANAEISSSNSSEKIIISSLQALLSHVWRLIISKQNLKPEERSAFVLPIDCRTRMCPKLEDNYFGSGIGATGYVIMQVGELMESGIGKIAMEMNKVISIQSHHEKVVNNYESWLKTPSIPEAGRSSSNLLIASSSPRFNYYGNDFGWGKPIAVRNGVGLKRNIGRVIVLGGEEEGSVDIQVCLPYDILEAMGNDHLSMDPITV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3372 451 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 6 448 - -
Mtr4g3372 451 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 448 - -
Mtr4g3372 451 Pfam Transferase family 6 439 - -
Mtr4g3372 451 Gene3D - 210 441 IPR023213 -
Mtr4g3372 451 Gene3D - 3 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3372 Mtr-Chr4 47014756 47016525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3372 46 431 Monolignol Biosynthesis Gene Families AT5G48930 26.238 9.83e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3372 - - mtr:MTR_4g094828 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3372 4 47014756 47016525 Mtr4g3372 4 47014756 47016525 ECH