Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3369 ATGGCTATCAATAATGGAGAGGAACAACAAAACCAAATCATTGGACACACAGATCTTGCTCACAAGACTCTCCTTCAGAGTGATGCACTTTATCAGTATATACTTGACACAAGTGTGTTTCCAAATGAACACCCTTGCTTGAAGGAGCTTCGTGAGATGACAGAAAAACATCCTCGGAACCTTATGGCCACACCTGCTGATGAAGGACAACTTATAAGGATGTTGATTAAGCTCATCAATGCAAAGAACACAATGGAAATTGGTGTCTACACTGGTTACTCTCTTCTCTCCACTGCTCTTGCTCTTCCTTCTGATGGAAAGGTATTGGCTTTGGACGTGAGTCGGGAATACTATGAGCTGGGATTGCCAATAATTGAAAAAGCTGGAATTGCTCACAAAATTGACTTTAGAGAAGGACCTGCTCTCCCTCTTCTTGACCAACTTATTCAAGACGAAAATAACAAGGGGGCATTTGATTTTGTTTTTGTGGATGCTGATAAGGATAATTACTTAAACTATCATGAGAGGATAATTGATCTTGTTAAAGTTGGAGGATTGATTGGATATGATAATACTTTATGGTTTGGATCAGTTGCTGTTCCAGATGATGCTCCTATGCTGGATTTCGTTAAACGTTTACGTGGTCATGTGATTGAGCTTAACAAATATTTAGCTAAAGATTCAAGGGTCGAGATTTGTCAGCTCCCCGTCGGTGATGGCATTACCCTGTGCCGCCGCATCAGCTGA 747 0.4096 MAINNGEEQQNQIIGHTDLAHKTLLQSDALYQYILDTSVFPNEHPCLKELREMTEKHPRNLMATPADEGQLIRMLIKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDVSREYYELGLPIIEKAGIAHKIDFREGPALPLLDQLIQDENNKGAFDFVFVDADKDNYLNYHERIIDLVKVGGLIGYDNTLWFGSVAVPDDAPMLDFVKRLRGHVIELNKYLAKDSRVEICQLPVGDGITLCRRIS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3369 248 Gene3D Vaccinia Virus protein VP39 13 248 IPR029063 -
Mtr4g3369 248 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Mtr4g3369 248 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 247 - -
Mtr4g3369 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Mtr4g3369 248 Pfam O-methyltransferase 42 247 IPR002935 GO:0008171
Mtr4g3369 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Mtr4g3369 248 CDD AdoMet_MTases 86 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3369 Mtr-Chr4 46993855 46996900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3369 5 248 Monolignol Biosynthesis Gene Families AT4G34050 71.429 1.08e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3369 K00588 - gmx:100305498 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3369 4 46993855 46996900 Mtr4g3369 4 46993855 46996900 ECH