Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3364 ATGGATTGGGTACGAGGAAAAACAGTTGGAAGAGGAAGCTTTGCAACTGTTAATTTAGCTATACCTAAAGCCAATTCATATTCAACCCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAACGAGAAACATGTTCTTCATCAACTTGGTTCTTGTCAAAGAATCATTCCTTGTTTCGGAGATGATTATACTTTTGAGAATGGCAAAGAGTATTACAATTTATTTCTCGAATACGCCTCGGCCGGAACACTCTCCGATCAGGTGAAACTCAATGGTGGCCGGATACCGGAGCAACACATTCGTCGTTACACGAGGTCAATCGTTGAGGGACTTGATCACATTCATCGCAATGGATTCGTTCATTGTGATATAAAGCTTCAAAATATTTTGGTATTCAATGATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCCAAGAAAACAGGGGAAAAACAGAGTTTTGAATGCAGAGGAACCCCGCTTTTTATGTCGCCGGAATCAGTAAACAATGGCGAGCATGAATCTCCGGCGGATATTTGGGCACTTGGGTGTGCAGTGGTGGAGATGGTAACTGGAAAACCAGCTTGGAATTTGGAGAAAGATTCAAATATGTGGTCGTTGTTGCTTCAGATTGGTGCCGGAGAAGAATCGCCGTTGATACCCGAAGAATTATCGAAAGAAGGAAAAGATTTTGTTGAGAAGTGTTTTGTTAAAGATCGAAGAAAGAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGAAGAAGTGAAGAATGTTGATGAGTCGTCACCAAGAAATCACTTTGATTTCAATGATTGGGTTTCTAGTGTGAATGATTCTGCTCCGAATTCACCGGAATTGGAAGAGTTAAGTCCATGGGATGTTGATTCTAGTATTGATTCTGCGGTGGACCGGCTCGGGAAGCTTCTGACGGTTGAAAAGCCGGTGAGTTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 1008 0.4216 MDWVRGKTVGRGSFATVNLAIPKANSYSTPTAVKTSEVSTSSSLKNEKHVLHQLGSCQRIIPCFGDDYTFENGKEYYNLFLEYASAGTLSDQVKLNGGRIPEQHIRRYTRSIVEGLDHIHRNGFVHCDIKLQNILVFNDGEIKIADFGLAKKTGEKQSFECRGTPLFMSPESVNNGEHESPADIWALGCAVVEMVTGKPAWNLEKDSNMWSLLLQIGAGEESPLIPEELSKEGKDFVEKCFVKDRRKRWTAEMLLNHPFVEEVKNVDESSPRNHFDFNDWVSSVNDSAPNSPELEELSPWDVDSSIDSAVDRLGKLLTVEKPVSWSESDSWISVR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3364 335 ProSitePatterns Protein kinases ATP-binding region signature. 9 34 IPR017441 GO:0005524
Mtr4g3364 335 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 314 - -
Mtr4g3364 335 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3364 335 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 314 - -
Mtr4g3364 335 Pfam Protein kinase domain 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3364 335 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
Mtr4g3364 335 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3364 335 CDD STKc_MAPKKK 2 260 - -
Mtr4g3364 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr4g3364 335 SUPERFAMILY Protein kinase-like (PK-like) 2 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3364 Mtr-Chr4 46937547 46938898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3364 1 335 MAP Kinase Kinase Kinase AT4G36950 53.295 6.99e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr4g3364 Pkinase 2.9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3364 - - aprc:113858661 495.352