Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr4g3362 | ATGGCATCATCACAGGTTGAAATAGCTTCCTTTGATTCAACACCAACATGGGTTTCAAGTGTTGCTAAAAAAAACAAACCTGGAAGCCTAAATTTCAACAAAAAATTTCCTAATGTATTTGGAGACAAAAATGATTCTTCTTTGTCTGCATTGGTGAGTCCAAGGCACTCAAAGATCATTGATCGATGGGCCGCAAGACAAGCTCAAGAAGTGGCAAAAAATCTTGAAAAAAATAATGAGAATGTTGTTGTTAAGAGGTTTGATAATTTTCCTTCAAGGTCATCAAGTTTCAATTCTAGGAGAGGTTCTGTTTCACCTCCTCGTTCTGACGGATCATCTGAAAGCGAAAAAACATTCAACATTGGTGCTTCTTCTCTTGTTCAAATGTGGGAAAAAAGGCTTAACAACCAATCCAATTGCACAAAACAAAATGCACCATCATATGTAAGAACTAATTCTGATGCAAGTAGCAATGAGATTAATGCTAGTTCTGTGGAAGAACCAGAAAAAGGTGAATCCTCTGATGAAGCATATTCATATGGAGAATATGATAAACCAAGACTAAGTATTGATGAAACTTGTTCACCAAAAGTGCATTATAATTTAGATGCTTTTAAAAGCGAGAAAATCAAGGTTGCTGATATTATAAAGAAACTTTCTGTTACAAATGATGAGAATGATCATGAACAAAGTAATAGTGCGACGGGTTCTCCATGTATTTCCACACCAAAACAATTAGCAGAACATAGAGGTTTTGGTCAGGTCACAAGCCACCCACGTATTAGAGGGCGCCAAGCATTTAATGATTTGATTATGCAGTTTGAGTGTGATCGACATGGCGAGCTCAACAATCTTGCAGAGCGAGGCGCGGTTTCTAAGTTCACACAAAGAGGTCGCATTCAGTCATTGCTTCGACTTCGATTATTACAACGTGGAGTAGCAGCTTTTGATCCATCCAGCTTGAAATTAACAACACTGGAAGGGAACAAAAAACAATCAACAACACCCGAAGGGAACAAAAAACAATCAACAACACCGGAGGGGAACAAAAAACAACAAGGATCAGTAATTATGCAACTAAGGGAAAGATTTAACACAAAAGATGAACAGAAAACTTCATCCCTAATAGAAGTGTCCGAGCCGAGAAGTATAGACAGGGAGACCATAAACAATACCGCACAATTGAATAAATTTCACACTACTAATCAACTTAACAAAGAAATTGTTTGCAGCAAGATAGTCACTAACATCCACACTAAGAAAAATAAACTGAATGTAGTTTCTCAAACTAGGGCAGATATCAAAGAAGAAGCCCGTATAATTTATGGTTTTGACCCTCAAAATCACGGTCCAAAAGAAATTCCTGTGGAATTATCATCCAAGGTTGACTCAAACGCAAATGATATAACTGATAAAGTCGAGGCAAGAGACCAACAATTATATGATACTATTGAAACCAATTATTACAATGAAATGTTAGAAGAGAAAGAGTGCAGTGACTATAATTATGATGAAATTAGCGCAAGTTATGACTGGGCGAGTCCTATTTCCCGGCCTAGAAGCTACTGGGAAGAGCTCAGACAAGAATGGTATAAGGAAATGCTTGACTTTGCTTCTGACAACGATGAGAGACGTAAACTCCTTGAAAGAAAAACAGTTTCAACTGTCCTTTCTAGTGACTTTCGAGAAAAGATGGATAAATTGATGGAGTCTCATGTGGGAACACAAACACACTTGGTCAATAATCAATGCGACGAGGAAGATGAAGAAGGAAATACAAAACAATTGATGGCATTTTATCACGATCGCCTTCGTGACACAAGGGAAAAAGAGACGAGGAGTAATGAGGAAGAAATGGATGAAGAGAAGGTAGAGGAGCATGAACATGAAAGCATCAGTAGTGGCTCAGATCATGAACTTGGTGATTGTCAATCCTCATCATCAGCAGACACACCATCCTCAGCAACATGGAGTTATAGAGACACTGATATTGGAGATGATTCTGATAGAGTTGCATTTGTATCCTCACCATTGCCTTCTCAATCTCAATCTTGCTATGAAGATAGTAGAGAAAACTCTCCATCCGCAAATCAACGTTCAATTGAAATGGAAATTATATACGGTTTGCGAGGGCAAATGGAACAACTTTTTCAAGAGATTTCTGAGCTAAGGAAAACAATAAAAAACTGTGCAGACACACAAATGCAGATGCAATTACAACAATCCCAAAACCAAGAGGTTCACAAATTTAAAGACAAGAAATCCAGTAACAAGACATCAAAGAAAGGCATGTGCTGCATTTGCAATGAAAATAAAGTAAACTCAGTTTTATACAGATGTGGGCACATGTGTGCATGTCTCAACTGTGCCAATGAGTTGCAATGGAAAAGTGGAAAATGTCCAATATGCCAAGTTGCAATAATAGATGTTGTCAAAGTACATACCAACATATAA | 2454 | 0.3769 | MASSQVEIASFDSTPTWVSSVAKKNKPGSLNFNKKFPNVFGDKNDSSLSALVSPRHSKIIDRWAARQAQEVAKNLEKNNENVVVKRFDNFPSRSSSFNSRRGSVSPPRSDGSSESEKTFNIGASSLVQMWEKRLNNQSNCTKQNAPSYVRTNSDASSNEINASSVEEPEKGESSDEAYSYGEYDKPRLSIDETCSPKVHYNLDAFKSEKIKVADIIKKLSVTNDENDHEQSNSATGSPCISTPKQLAEHRGFGQVTSHPRIRGRQAFNDLIMQFECDRHGELNNLAERGAVSKFTQRGRIQSLLRLRLLQRGVAAFDPSSLKLTTLEGNKKQSTTPEGNKKQSTTPEGNKKQQGSVIMQLRERFNTKDEQKTSSLIEVSEPRSIDRETINNTAQLNKFHTTNQLNKEIVCSKIVTNIHTKKNKLNVVSQTRADIKEEARIIYGFDPQNHGPKEIPVELSSKVDSNANDITDKVEARDQQLYDTIETNYYNEMLEEKECSDYNYDEISASYDWASPISRPRSYWEELRQEWYKEMLDFASDNDERRKLLERKTVSTVLSSDFREKMDKLMESHVGTQTHLVNNQCDEEDEEGNTKQLMAFYHDRLRDTREKETRSNEEEMDEEKVEEHEHESISSGSDHELGDCQSSSSADTPSSATWSYRDTDIGDDSDRVAFVSSPLPSQSQSCYEDSRENSPSANQRSIEMEIIYGLRGQMEQLFQEISELRKTIKNCADTQMQMQLQQSQNQEVHKFKDKKSSNKTSKKGMCCICNENKVNSVLYRCGHMCACLNCANELQWKSGKCPICQVAIIDVVKVHTNI* | 818 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr4g3362 | 817 | Coils | Coil | 65 | 85 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 165 | 179 | - | - | |
Mtr4g3362 | 817 | Pfam | Zinc finger, C3HC4 type (RING finger) | 762 | 809 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 600 | 698 | - | - | |
Mtr4g3362 | 817 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 736 | 815 | IPR013083 | - | |
Mtr4g3362 | 817 | Coils | Coil | 713 | 733 | - | - | |
Mtr4g3362 | 817 | PANTHER | BNAC05G24000D PROTEIN | 42 | 816 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 637 | 661 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 226 | 242 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 137 | 164 | - | - | |
Mtr4g3362 | 817 | Coils | Coil | 601 | 621 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 325 | 355 | - | - | |
Mtr4g3362 | 817 | PANTHER | BNAC05G24000D PROTEIN | 42 | 816 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 137 | 179 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 674 | 698 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 92 | 117 | - | - | |
Mtr4g3362 | 817 | SUPERFAMILY | RING/U-box | 764 | 809 | - | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 600 | 617 | - | - | |
Mtr4g3362 | 817 | CDD | mRING-HC-C3HC5_NEU1 | 765 | 803 | - | - | |
Mtr4g3362 | 817 | ProSiteProfiles | Zinc finger RING-type profile. | 765 | 804 | IPR001841 | - | |
Mtr4g3362 | 817 | MobiDBLite | consensus disorder prediction | 223 | 243 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr4g3362 | Mtr-Chr4 | 46915005 | 46918462 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr4g3362 | 765 | 816 | C3H Transcription Factor Family | AT3G06140 | 36.538 | 2.03e-06 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr4g3362 | - | - | mtr:MTR_4g094795 | 1564.67 |