Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3353 ATGTTAGTAATAACACCATTGTTATATTACTCACTCCTTTCCCTTAGTTTCATTGTAACCTTGAAACTTTTACTCCAAAGAAGAAAGTTCAAAAACCTTCCACCAGGTCCATCAATATCTCTTCCCATAATAGGAAACCTCCACAACATAAACCTCCCACTCCACCGTTCCCTTCACAACCTTTCACAAAAATACGGCAAAATATTCACCCTATGGTTTGGTTCAAGTCGTGTTGTTGTTATCTCCTCCCAAACCCTACTTCAACAATGTTTAACAAAACATGACGTTGATTTATCGAACAGACCTCGCTTCCTCACCGGAAAATATCTCTTCTACAATTACACAAGCTTAGACTCCGCCCCATATGGCGACCACTGGCGTAACCTACGTCGCATCATCACCCTTGACATCCTCTCAACGCAACGTCTCAACTCCTTCGTTGGCTCGCGAAGGAGTGAGACGTTGAAACTTATAATAAAACTTGCTAAAGACACGAGTGAGAGGTTCACTCGTGTTGAGTTGAGGACGAGGCTAACCGATATGACGTTTGAGATTATGACAAAAATGGTTGCTGGTGATGCGGAGGAAGGGAAGAAGTTTAAAGAGATGATAAATGAGATGATGCCGTTGTTTGGGGCGAGTAATATGGGAGATTTTGTGCCTTTACTTAGGTTGTTTGATTTTGATGGTTTGGTTAAGAGGATGAAGGATATTGGGAAGAGAGGTGATTCGTTTTTGCAAGGAATTGTTGAAGAGATTAGAAGTGGGAAGCATGGTGATAATAACATGTTACAACATCTTTTGACTCTGCAGAAATCTCAACCTGATTATTATTCTGATGAGATTATCAAAGGGCTTGTTCAGGGTATGTTCTTAGCTGGAACTGACACAACAGCCGTGACTCTAGAGTGGGCGATTGCTACTTTACTTAATCACCCAAATATATTGAAGAAAGCAAAGGATGAACTGAACACTCAAATAGGGTATGATCGTTTGGTAGAAGAGTCAGACATTCCAAATCTTTCTTACATTCAAAACATTATCTACGAGACACTTCGGTTGTACTCTCCAGCTCCATTATTATTGCCTCGTTTTTCTTCAAACGAGTGCAATATTGAAGGATTTACTATTCCACGTGACACGATAGTTTTGATTAATGCATGGGCCATTCAAAGAGATCCTGAAACATGGAGTGATGCTTCATGTTTTAAGCCAGAGAGATTTGAAAAAGAAGGGGAAGCAAACAAGTTAATTGCATTTGGTTTTGGAAGGAGGGGTTGCCCTGGAATAGGTTTAGCACATCGTACAATGGCATTGAGTTTGGGATTATTGATTCAGTGTTTTGAATGGAAAAGATTAAATGATGAAGAAGTAGATATGACAGAAAATAAAATAGGGGTCGTCACGCAAAAGCTCAATCCACTAGAAGCAATGTGCAAAGCAAGACCTATCATCAACAAAGTTATCCAAGAATCGAGTGTCTAG 1485 0.3993 MLVITPLLYYSLLSLSFIVTLKLLLQRRKFKNLPPGPSISLPIIGNLHNINLPLHRSLHNLSQKYGKIFTLWFGSSRVVVISSQTLLQQCLTKHDVDLSNRPRFLTGKYLFYNYTSLDSAPYGDHWRNLRRIITLDILSTQRLNSFVGSRRSETLKLIIKLAKDTSERFTRVELRTRLTDMTFEIMTKMVAGDAEEGKKFKEMINEMMPLFGASNMGDFVPLLRLFDFDGLVKRMKDIGKRGDSFLQGIVEEIRSGKHGDNNMLQHLLTLQKSQPDYYSDEIIKGLVQGMFLAGTDTTAVTLEWAIATLLNHPNILKKAKDELNTQIGYDRLVEESDIPNLSYIQNIIYETLRLYSPAPLLLPRFSSNECNIEGFTIPRDTIVLINAWAIQRDPETWSDASCFKPERFEKEGEANKLIAFGFGRRGCPGIGLAHRTMALSLGLLIQCFEWKRLNDEEVDMTENKIGVVTQKLNPLEAMCKARPIINKVIQESSV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3353 494 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 487 - -
Mtr4g3353 494 SUPERFAMILY Cytochrome P450 34 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 Gene3D Cytochrome P450 21 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 9 487 - -
Mtr4g3353 494 Pfam Cytochrome P450 34 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Mtr4g3353 494 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3353 494 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3353 Mtr-Chr4 46833713 46836656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3353 12 492 Cytochrome P450 AT4G37370 49.697 7.28e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3353 K13260 K22932 gmx:100784120 668.692