Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3334 ATGGCGCCGAGTATTCAACTAACTTCCGCCGGCGCCGGCGAAGATTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAACCAACCGGATTCAGGTCAGAATCACCGGTATGACATGCGCCGCTTGCTCTAACTCCGTTGAGGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTCGCTTTACTTCAAAACAAAGCCGACGTCGTTTTTAATAGAAACCTCGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCCAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGTGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAACGATATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAATCGTGATAAGTAAAGAAGATATTGTTACTGCAATTGAAGATGCTGGTTTTGAAGCTTCGTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTTGGTGTGTGTTCTTTGGTTGATGCTAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATACGTGTAGTTAGTAATGACAAATATACGTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTTTACATAGCAGCTTTCAGAGCTCTCAGAAACGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTCACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGAAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTACTGGTTGTTAAAGACAAAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCTGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTTTTAAGTCAGATAATTAATTTGGTGGAGACGGCTCAGATGTCAAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTATACTGCTGGGGCTCTTGGAGCTTACCCCGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTCGTGATTGCATGCCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTTGGTAATAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAATTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCATGCAACGGAATATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTGTAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGCGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGATGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTCGCCATGGCCTACAATATTATTGCCGTACCGGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTCAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAGATAATTGTAAATTAA 2979 0.427 MAPSIQLTSAGAGEDSGDLEDVRLLDSYDKNDVNDDGTNRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPIVISKEDIVTAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGILIGVLGVADSLKREASVVVEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3334 992 SFLD p-type atpase 628 917 IPR044492 -
Mtr4g3334 992 CDD HMA 126 189 IPR006121 GO:0046872
Mtr4g3334 992 Pfam haloacid dehalogenase-like hydrolase 642 880 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 646 660 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 791 802 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 813 823 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Mtr4g3334 992 PRINTS P-type cation-transporting ATPase superfamily signature 889 901 - -
Mtr4g3334 992 PANTHER ATP7, ISOFORM B 4 985 - -
Mtr4g3334 992 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Mtr4g3334 992 SUPERFAMILY HMA, heavy metal-associated domain 35 108 IPR036163 GO:0046872
Mtr4g3334 992 Gene3D - 653 745 IPR023299 GO:0000166
Mtr4g3334 992 Gene3D - 746 797 IPR023299 GO:0000166
Mtr4g3334 992 PRINTS H+-transporting ATPase (proton pump) signature 838 854 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3334 992 PRINTS H+-transporting ATPase (proton pump) signature 866 882 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3334 992 PRINTS H+-transporting ATPase (proton pump) signature 897 922 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3334 992 ProSitePatterns Heavy-metal-associated domain. 45 75 IPR017969 GO:0046872
Mtr4g3334 992 SFLD Haloacid Dehalogenase 628 917 - -
Mtr4g3334 992 SUPERFAMILY HAD-like 645 972 IPR036412 -
Mtr4g3334 992 CDD P-type_ATPase_Cu-like 287 962 - -
Mtr4g3334 992 TIGRFAM TIGR00003: copper ion binding protein 41 104 IPR006122 GO:0005507
Mtr4g3334 992 TIGRFAM TIGR00003: copper ion binding protein 126 188 IPR006122 GO:0005507
Mtr4g3334 992 Pfam E1-E2 ATPase 427 625 - -
Mtr4g3334 992 CDD HMA 42 105 IPR006121 GO:0046872
Mtr4g3334 992 Gene3D - 613 923 IPR023214 -
Mtr4g3334 992 ProSiteProfiles Heavy-metal-associated domain profile. 124 190 IPR006121 GO:0046872
Mtr4g3334 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 379 955 IPR023298 -
Mtr4g3334 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Mtr4g3334 992 Gene3D - 414 536 - -
Mtr4g3334 992 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 399 667 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3334 992 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 730 949 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3334 992 Gene3D - 39 109 - -
Mtr4g3334 992 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 360 975 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mtr4g3334 992 Pfam Heavy-metal-associated domain 43 103 IPR006121 GO:0046872
Mtr4g3334 992 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Mtr4g3334 992 Gene3D - 125 190 - -
Mtr4g3334 992 ProSiteProfiles Heavy-metal-associated domain profile. 40 106 IPR006121 GO:0046872
Mtr4g3334 992 PANTHER HEAVY METAL P-TYPE ATPASE 4 985 - -
Mtr4g3334 992 SUPERFAMILY Calcium ATPase, transduction domain A 446 532 IPR008250 -
Mtr4g3334 992 SUPERFAMILY HMA, heavy metal-associated domain 120 193 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3334 Mtr-Chr4 46646290 46652170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3334 1 989 Primary Pumps ATPases AT5G44790 72.989 0.0 1465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3334 K17686 - gmx:100798164 1652.88