Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3307 ATGCAGACTCACGAGTATTTTCTCTCAGGAAAGGCAGTACATCCTCTGGCAGATGAAGCCATTGGTACTTGTATGAATGCTCCACATGCTTCTGCTTTCGGTACTTACATGAATGCTCCACATGGTTCTGCCTTTGGTACTTATATGAATCTTTCACATGCTTCTACCTTTGATGCAGTTTTACCTCCAAGTGCGAGGCAGATAACACCCTTTGAAAGGTTTAACTTGCAGCCCTCTGAGGTTTGCCCTAAGAATTTCATCGTCTTTGATCAAACAGATCAACAAAACCGGATTTTGTTCCATCCTGCAACGACCTACAAGTTTAACAGTCCTGGCTTCAACAGTCATGCTACTTGCAATCAAGATTTCGAGAAGGATAAAATTAATCAAATGGAAACGGAATTGTCATCTTCTTTTGTAGAGGACTCTAAGGACATTGATGCATTGTTGAGCCTAGACTCGGATGAACTAGAAGACTATGATGAAGAAGAAGTCAGCACTGCAAGGACTCATGAAAAAGATGATAGTACGTCTGATACTTGCTCCAGTTACTGCACGAAATCAAGGAAGAAGAGGTTGTTATCATCCGCACATAACTCGTCAGGGACAAAGGGTTACTGCATCAGTGAAAAGAAACAACACCTAGAGATGAAGAGGATGGTGAAAATATTGAGAAATATCGTGCCTGGTGGAGGCAACCAAATGGATACCGTTACCGTTTTGGACGAAGCTGTAAAATACCTCAAGTCTCTCAAGGTTGAAGTCGAGCAATTCGGAGTTGGACCGTGA 789 0.4233 MQTHEYFLSGKAVHPLADEAIGTCMNAPHASAFGTYMNAPHGSAFGTYMNLSHASTFDAVLPPSARQITPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATTYKFNSPGFNSHATCNQDFEKDKINQMETELSSSFVEDSKDIDALLSLDSDELEDYDEEEVSTARTHEKDDSTSDTCSSYCTKSRKKRLLSSAHNSSGTKGYCISEKKQHLEMKRMVKILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGVGP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3307 262 Gene3D - 205 259 IPR036638 GO:0046983
Mtr4g3307 262 PANTHER TRANSCRIPTION FACTOR BHLH145 1 261 IPR037546 -
Mtr4g3307 262 MobiDBLite consensus disorder prediction 157 181 - -
Mtr4g3307 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 257 IPR036638 GO:0046983
Mtr4g3307 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 201 251 IPR011598 GO:0046983
Mtr4g3307 262 MobiDBLite consensus disorder prediction 164 178 - -
Mtr4g3307 262 PANTHER TRANSCRIPTION FACTOR BHLH144 1 261 - -
Mtr4g3307 262 SMART finulus 207 257 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3307 54 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 41.071 2.31e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3307 - - mtr:MTR_4g096660 499.975