Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3301 ATGGCGAAAAAAGCTAAAGCTTCTAACTCTCTCAAGAACGCTTCTTCTTCTTCGGCCTCCACCTCCGGGAAACTAGTGTTAGCAATTAAATCGAATGAGGGAATGAAGAGATCGTTGCGGCAGACTAAGTCAAGAGACATAACCAAAGCCGTGCAAAAAAAGAACAAGCAAAAGATTGATGCTAAAAAGCCGAAGAAACCCCCCACTGCTTTCTTCTACTTCTTGGAGGATTTTCGGAAAGAGTTTAAAGATCAGAATCCAGATGTTAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTTTGAGGAGAAAGTTCAATACTATGATATAGCAACAGAGAAACGTGCAGAATTTGATAGAGCAACGACAGAGTATAACAAGAAAATGGAAAGCGGCGAATATGAAGAAACCGATGAGGAGTCAGAGTATGACGAGTAA 459 0.4096 MAKKAKASNSLKNASSSSASTSGKLVLAIKSNEGMKRSLRQTKSRDITKAVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKMESGEYEETDEESEYDE* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3301 152 Pfam HMG (high mobility group) box 64 133 IPR009071 -
Mtr4g3301 152 MobiDBLite consensus disorder prediction 133 152 - -
Mtr4g3301 152 SUPERFAMILY HMG-box 53 135 IPR036910 -
Mtr4g3301 152 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 1 151 - -
Mtr4g3301 152 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 1 151 - -
Mtr4g3301 152 MobiDBLite consensus disorder prediction 36 64 - -
Mtr4g3301 152 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 64 133 IPR009071 -
Mtr4g3301 152 MobiDBLite consensus disorder prediction 1 64 - -
Mtr4g3301 152 CDD HMGB-UBF_HMG-box 64 128 - -
Mtr4g3301 152 SMART hmgende2 63 134 IPR009071 -
Mtr4g3301 152 MobiDBLite consensus disorder prediction 8 27 - -
Mtr4g3301 152 Gene3D High mobility group box domain 47 149 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3301 Mtr-Chr4 46300235 46303482 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mtr4g3301 HMG_box 2.3e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3301 - - lang:109362761 178.718