Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3296 ATGGCCGCATCATCCATGGCTCTCTCTTCACCAACCTTGGCTGGCAAGCCAGTCAAGCTAACCCCTTCAAGCCAAGAATTGGGAGCTGCAAGGTTCACCATGAGGAAGGCTGCTACCACCAAGAAAGTAGCCTCCTCAGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGCCCCCGTCTTACTTGACTGGAGAGTTCCCAGGTGACTACGGATGGGACACTGCTGGACTTTCTGCTGACCCAGAGACATTCGCCAAGAACCGTGAACTTGAAGTCATCCATAGTAGGTGGGCTATGTTGGGAGCCTTGGGATGTGTTTTCCCAGAGCTTTTGTCTCGCAATGGTGTTAAATTCGGTGAGGCTGTATGGTTCAAGGCCGGATCCCAGATCTTTAGCGAGGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAGAGCATTCTTGCCATCTGGGCTACCCAAGTTATCTTGATGGGCGCTGTTGAAGGTTACCGTATTGCTGGTGGTCCTCTTGGTGAGGTTGTTGACCCACTATACCCAGGAGGCAGCTTTGACCCATTGGGCCTAGCTGACGACCCAGAGGCTTTCGCAGAGTTGAAGGTTAAGGAACTCAAGAACGGTAGATTAGCCATGTTCTCTATGTTCGGATTCTTTGTTCAGGCTATTGTGACCGGAAAGGGACCTTTGGAGAACCTTGCCGATCATCTTGCCGACCCAGTCAACAACAACGCATGGGCCTATGCCACCAACTTTGTTCCCGGAAAGTGA 801 0.5194 MAASSMALSSPTLAGKPVKLTPSSQELGAARFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3296 266 MobiDBLite consensus disorder prediction 1 19 - -
Mtr4g3296 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Mtr4g3296 266 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g3296 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Mtr4g3296 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Mtr4g3296 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Mtr4g3296 266 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3296 Mtr-Chr4 46259306 46260360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3296 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 88.433 9.94e-172 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3296 K08912 - jre:108990271 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3296 4 46259306 46260360 Mtr4g3296 4 46259306 46260360 ECH