Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3295 ATGAGGACTTTTCTGGTTGGTGGAGCAGAAAGATTGATTAATCGATTGCAAAAGCATGGTGAGGAAGTTGGAACCACTGATTTCAATTTTTGTATGTGCTATGTAAAACCCCTTGCTAAAGGAGTAATTAAGGGAATGTTTGTCCCCAAACTTAGCGGAAATGGTGTTGTAGGTGAGGCTATTGCCCTTTTGGGTGCCCTTATCATGTCGCACAATCTTTTCCTCCACTCTGCTCTAGTGCTATCTCGAAAAATACCCGGTACTAAGCGCGACATCAATATTATGCGGGATGCATGCATATACTTTCTCATTGAGAGTGGTTTCACGTTGTTCGTTGCATTTCTAATCAATGTTGCAATGATTTATGTGACTGGTACTGCTTGCAAAGCTGATGATATTTCTGGAGAGAATGCTGATCGTTGCAATGATATTACCCTTAACTCTGCTTCTTTCCTTCTCCAGAATATGTTGGGACGTTCAAGCTCAACTATTTATGCCATAGCATTAGTAGCCTCAGAACAAAGTTCTGCCATCACTGGAACCTATGCAGGCCAGTTTATCATGTAG 567 0.4145 MRTFLVGGAERLINRLQKHGEEVGTTDFNFCMCYVKPLAKGVIKGMFVPKLSGNGVVGEAIALLGALIMSHNLFLHSALVLSRKIPGTKRDINIMRDACIYFLIESGFTLFVAFLINVAMIYVTGTACKADDISGENADRCNDITLNSASFLLQNMLGRSSSTIYAIALVASEQSSAITGTYAGQFIM* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3295 188 Pfam Natural resistance-associated macrophage protein 28 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3295 188 PANTHER METAL TRANSPORTER NRAMP5 30 188 - -
Mtr4g3295 188 PRINTS Natural resistance-associated macrophage protein signature 60 83 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3295 188 PRINTS Natural resistance-associated macrophage protein signature 173 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr4g3295 188 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 30 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3295 Mtr-Chr4 46249072 46254187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3295 28 188 Inorganic Solute Cotransporters AT1G15960 56.886 6.92e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3295 K21398 - mtr:MTR_4g094602 277.715