Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3287 ATGGAAAAGGAGCCACTGCTCCCATCATATTTCAGCCCCAGAAAGAAGCTTTCACCATTACCATCTCAACTTTTTCCTTTACCAGAAAACGATGAAATGGTTCTTCCTGTTACCCCTTCTGAGTTCAAGGATCGTCTCATTTTTGGTCCTTCACCAAGAGACCCTTCACCTTTGTCTGATGCCTTAACACTTTCACGTAATTCACCAAGTTCCTCTTCACATGATTTTGATTCATCACAACAGTCTCAACAACAACAATTGTCTTCTTGGTTAATTGATCCTAATTATCCATGGAGGAAAACAAATTTACATCGGTCGAGAACCGCGCCAGCGATGGCTGTTATTAGTGATTTTAATCATCATGCATCTGATAAAAGACCTCAATTTGGTAGTCAATCTATTGTTCATCAAGCTGTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTTATTTATTGGTTTAATCGGCATAATTTTACAGCAACTGAAACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTTACAATGTGTACAATAGGGTATGGTGATATTACACCTAATAGTACTGCAACCAAGATTTTCTCTATATTGTTTGTGTTGATTGGTTTTGGTTTTATTGATATACTGCTAAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGACAGTGAAGGGAAGAGGGGCGAAGGATGGGAGGTCATATATAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTAGTGGTACTTTGTATTGGACTCGGTGTCACGGTTATGCATTTTGTTGAAAGGCTTGGATGGGTAGATTCTTTTTATCTTTCGGTTATGTCTGTTACGACAGTTGGGTATGGTGATCATGCTTTCAAGACTTTGCATGGTCGTATCTTCGCCGCAATATGGTTGCTCGTGTCTACGCTTGCGGTTGCCCGAGCGTTCCTTTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCTAAGTGGATTCTTGGTCAGGATATGACCGTTGCTGAGTTTCTTGCTGCTGACATGGACAATAATGGATTTGTGAGTAAATCAGAATACGTTATATACAAGCTCAAGGAGATGGGAAAAGTGACGGAGAAGGACATCATGCAGATCAGTGAGAAGTTTGATAGACTAGATACCGGAAACTGTGGAAAAATAACACTTGGTGATCTCATGGAGGGTCATAGTTGA 1257 0.4041 MEKEPLLPSYFSPRKKLSPLPSQLFPLPENDEMVLPVTPSEFKDRLIFGPSPRDPSPLSDALTLSRNSPSSSSHDFDSSQQSQQQQLSSWLIDPNYPWRKTNLHRSRTAPAMAVISDFNHHASDKRPQFGSQSIVHQAVILLVLYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFIDILLSGMVSYVLDLQENHLLRTVKGRGAKDGRSYIVDVKKGRMRIRMKVALALGVVVLCIGLGVTVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADMDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISEKFDRLDTGNCGKITLGDLMEGHS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3287 418 PANTHER TWO-PORE POTASSIUM CHANNEL 3 81 413 - -
Mtr4g3287 418 PRINTS Two pore domain K+ channel signature 177 205 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr4g3287 418 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr4g3287 418 MobiDBLite consensus disorder prediction 58 80 - -
Mtr4g3287 418 Pfam Ion channel 140 220 IPR013099 -
Mtr4g3287 418 Pfam Ion channel 264 333 IPR013099 -
Mtr4g3287 418 Gene3D - 114 238 - -
Mtr4g3287 418 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g3287 418 Gene3D - 325 418 - -
Mtr4g3287 418 SUPERFAMILY Voltage-gated potassium channels 249 355 - -
Mtr4g3287 418 MobiDBLite consensus disorder prediction 45 80 - -
Mtr4g3287 418 Gene3D - 263 324 - -
Mtr4g3287 418 SUPERFAMILY EF-hand 353 414 IPR011992 -
Mtr4g3287 418 SUPERFAMILY Voltage-gated potassium channels 126 220 - -
Mtr4g3287 418 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Mtr4g3287 418 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 81 413 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3287 Mtr-Chr4 46180766 46188965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3287 4 418 Ion Channels AT4G18160 62.269 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3287 K05389 - gmx:100804249 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3287 4 46180766 46188965 Mtr4g3287 4 46180766 46188965 ECH