Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3274 ATGATTCCTTTCCCTTCTCAACTCTCACCACCTTTTGTTTGTTGTTTACAAGTTTTGAACTCAGCCAAAGAGAAAGTCATTCATCAAACAACTATCATGAAGGCTCATTCTAACTTGCATAAGAGAAAGTCTACTTTGACTGCTGATGGGAATCATGCTGCTTTTAAGAAGACATCAAGAAAGGGAAGCTATGTGGAGACTCTTGACAGAAAGGCAGAAGATATCTTTACTAGAGAAGAAAAATATAGCGAGGATGGAAATTACAATGAAACCGGTGATGACAACAATGAAGAAAAATCTGAAGGAGATGATGATGTGATTGAAGATCAACAAGAGGAAGGAGAGTACTTACTAGGAGATGACGGTCCTACTGCAGTTGCAGAAGATGGAATTCACAAAGGTCTGTTCACGAAAGACGCAGATGAAGATAATAAAACTTCGACTCGACATTTCAGCCATGGATGTCATTTAGTTGAAGGAAAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAGGAAGCTCAATGGATATGATTTAGGACTGTATGCAATATTTGATGGACACGCTGGTCCTGATGTTGCAAAATATTTGCAAAACCATCTATTCCAAAATATATTGAGTGAGCCTGATTTCTGGGAGAATCCAGTGCATGCTGTTAAGAAAGCATGTAAAGCTACAGACAACGAGATTTTAGAAAACATAGCCGATTGGCGTGGAGGATCAACAGCTGTGGTAGCAATACTAATTAATGGAGTAAAGCTACTAGTTATAAATGTTGGCGATTCTCGAGCAATATCATGTAAAAATGGTCTTGCAAAACAACTTACTGTGGATCACGAACCGGAAAAGGAAAAAGATCTGGTTGAGAGCAGAGGAGGTTGTGTTTTTAAGAGACCTGGGGATGTTCCAAGAGTGGATGGCCAGTTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATCACTGCAGAACCAGACGTGATGATCAAGAAAATTGACGAGGACACTGAATTCATCATTTTTGCAAGTGATGGTCTATGGAAGGTGATGACGAATCAAGAGGCTTGTGACTGTATCAAGGATGTTGATGATGCTCAAAAAGCAGCTACAAAGTTAGTCAAAGAAGCCAAATCTCTTGGAAGCTGTGACGATATTTCATGCATAGTTGTTATGTTCTAG 1197 0.3968 MIPFPSQLSPPFVCCLQVLNSAKEKVIHQTTIMKAHSNLHKRKSTLTADGNHAAFKKTSRKGSYVETLDRKAEDIFTREEKYSEDGNYNETGDDNNEEKSEGDDDVIEDQQEEGEYLLGDDGPTAVAEDGIHKGLFTKDADEDNKTSTRHFSHGCHLVEGKMNHGMEDYVFAQHRKLNGYDLGLYAIFDGHAGPDVAKYLQNHLFQNILSEPDFWENPVHAVKKACKATDNEILENIADWRGGSTAVVAILINGVKLLVINVGDSRAISCKNGLAKQLTVDHEPEKEKDLVESRGGCVFKRPGDVPRVDGQLAMTRAFGDGKLKEHITAEPDVMIKKIDEDTEFIIFASDGLWKVMTNQEACDCIKDVDDAQKAATKLVKEAKSLGSCDDISCIVVMF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3274 398 ProSiteProfiles PPM-type phosphatase domain profile. 152 398 IPR001932 -
Mtr4g3274 398 SUPERFAMILY PP2C-like 149 398 IPR036457 -
Mtr4g3274 398 CDD PP2Cc 151 396 IPR001932 -
Mtr4g3274 398 SMART PP2C_4 142 396 IPR001932 -
Mtr4g3274 398 Gene3D - 147 398 IPR036457 -
Mtr4g3274 398 MobiDBLite consensus disorder prediction 76 105 - -
Mtr4g3274 398 ProSitePatterns PPM-type phosphatase domain signature. 184 192 IPR000222 GO:0043169
Mtr4g3274 398 PANTHER ALPHABET, ISOFORM E-RELATED 94 398 - -
Mtr4g3274 398 MobiDBLite consensus disorder prediction 76 95 - -
Mtr4g3274 398 Pfam Protein phosphatase 2C 179 391 IPR001932 -
Mtr4g3274 398 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 94 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3274 Mtr-Chr4 46097852 46101590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3274 149 398 PP2C-type Phosphatase Gene Family AT4G28400 58.964 7.25e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3274 - - gmx:100814772 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3274 4 46097852 46101590 Mtr4g3274 4 46097852 46101590 ECH