Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3273 ATGGTACTTTGTTTATTCCTTAAACTTCAACTTCCACAGTTTCAGAAAAACAAGAACATGGCTTCAACAGTTTCAGGTTTGTTAACAAACATGTTAGACAAACTACTAACAACAGCTTTCCACAACATTTCAATGGCAAAGGGTCTCCAACGTGAAGTAACCAATCTCCAAAACACTCTCACCATCATCAATGCATTCATTCTTGATGCTGAAAACAAACAAACACAAAACAACTCCATTTCACTCTGGCTTCAACAACTCAAAGATGCTTTGTTTGATGCTAGGGACATTTTTGATGAGATTGAATTTGAATCTTTAAGGAAACATGTTGTCAAAAAACATGGAACCTTCAACACTAAGGTACAACGTTTTCTCTCATCTTCTACTAACCCTCTTACATTTCGTGTTCAAATGGCTCATAAGATCAAACATATGAATACTAGAATAGATCAGATTGCTTCTCTTAGGATGAAATTGGGTTTAATAGTATCAGAGAATCATGCCAGTGGAAGTAGTAGTACTAGGGTTACAAGAGAGACTCATTCTTATGTTAGACCTTCTCATGTGATTGGTAGAGATGGAGAGAAAGAAAAGATTATTAAGTTCTTGATGGATCCACTATTGGTTAGCGATGATGATGAGATTGATGTTATTCCAATTGTTGGAATTGGAGGGTTGGGAAAGACAACACTTGCTCAATTAGTTTATAATGATGATAGGGTGATTGAGCTTTTCGATTTGCGTATGTGGGTTTTTGTTTCTGATGTTTTTGATGTTAAGAGGTTAGTGTTAGACATTCTTAAAGCTATGCATGGAATGGAAGTAGATGCTCACAAGTATAGTTTTGATCAATTGCAAAATATGCTTCGCGAAAGGTTATGGGGGAAGAAATTTTTGCTTGTTCTAGATGATGTTTGGAATGAAGATTATAGAGAATGGCTTGAATTGAAAAATCTTTTACTGGGGATGCATGATGGTGATGATGATAAACTTGGGAATAAGATTATCACGACCACTCGTAGTGACAGGGTTGCTTCGATAATGGGGAATGCTTATAAGCACAGCTTGAAGTATCTCCCAGAAGAAGATTGTTTACAGCTTTTTGTTAAGTGTGCATTTCCAGCAGGAGAGGCGAAACACAACCCAAGGCTTATGGAGATTGGGAAGGACATTGCTAGAAAGTGTAAAGGGTTACCCCTAGCAGTGGTAAGTTTAGGGTGCTTGCTTAGAGCAAGGCCTGGTGAAAGTGAGTGGAAGAAAGTACGAGATAGTGAAATTTGGAAAGTGAACCCTCAAGACGATGATGGCATTTTGGCTGCGTTGAAACTAAGCTATAATCACTTGTCATCTGGATTGAAACAATGTTTTTCTTATTGTTCAATTTTTCCTAAGGGTTATGAATATACTAATTTGGAGCTGATTTCGTTTTGGATGGCACATGGACTACTGCAAACGAAAAATGAAGATGAGGAACCAGAAGATCTTGGGGAGTTTTATATTCAGGAGCTAGTTTCAAGGTCTTTTTTTGAATGTGCTGCTGAAGAACAATTGGTTATTGACGGTCTTATTTCTGAAGAACTTGAACTTCTAGGCATCAACTTTTTCAAAATGCATGATCTTGTTCACGACCTTGCTGTGTTCACAATGCAAAGTGAAAGGGCAGTCGTAAAATTTAAATCAACAAATATAAAAGAAAAAGTGCAGCATTTATCATTTTCAGACAGTGGTGAAGGAGTTCCTACCTTCGGTAAAATGCCGAGTAAGATCCGAACCATTGGATTCTGGCATGCTAGTCAAAAGGAACTTGCAATCACCGAACCTTTTGTCAAATGGATCTCCAACAAGTTCAAGTACATCAGGGTGTTGAATATTCAAGGTTCTAATTTTCAGTTCTTGCCGGATTGTTTCGACAAAATGAAGCATTTGAGGTCTCTTGATCTAAGCTATTGCCAGAGGTTGGAAAAACTCCCAGATTCCATTTGCATGCTTCATAACCTAGAGGTATTAAATCTCTGTAGATGTGTATCACTTGCATATATTCCCAAAAATTTGCTGAATCTTATCAGCCTTAGGATTTTGTGGATTACCACAAAAATCACTGATTTGTCTTTCATAGGTATTGGAAACTTGAAATATCTACAAATTTTAATTTTGTGGAATTGTGATAATTTGGTCTTCCTTCCACGTGATTTGAGGCACTTGAGTGCTTTAAAGAGACTGACTATCGAGGCTTGTGAAGAGGTGGTTAGTTTTGAGGATGAAGGAGAAGATGATGAAAACTACTCCTTGAAACTTGAACGGGTTTCAATTGACAAATTACCAAATTTGGTAGCATTACCTGGTTGGCTTAGAAGAGCTGGTACAACATTGAGATACTTGGGCATTTCAGAGTGTTCGAGTTTAATGGCATTGCCAGAATGGTTGGTAAATCTAACATCACTCGAGACGCTTCTCATTGCCGACTGTCCAAATTTGACACTACCCCAACATATGGATCGCCTTCAAAACCTTCAGAATTTAAAGATATATGGATGTCCTCAGCTAGTTGAGAGATGTAACCAAAATACAGGCAGTGACTGGCACAAGATAGCTCATATCCCAAATGTTGAACTTGGCAGCGTTTAG 2625 0.3779 MVLCLFLKLQLPQFQKNKNMASTVSGLLTNMLDKLLTTAFHNISMAKGLQREVTNLQNTLTIINAFILDAENKQTQNNSISLWLQQLKDALFDARDIFDEIEFESLRKHVVKKHGTFNTKVQRFLSSSTNPLTFRVQMAHKIKHMNTRIDQIASLRMKLGLIVSENHASGSSSTRVTRETHSYVRPSHVIGRDGEKEKIIKFLMDPLLVSDDDEIDVIPIVGIGGLGKTTLAQLVYNDDRVIELFDLRMWVFVSDVFDVKRLVLDILKAMHGMEVDAHKYSFDQLQNMLRERLWGKKFLLVLDDVWNEDYREWLELKNLLLGMHDGDDDKLGNKIITTTRSDRVASIMGNAYKHSLKYLPEEDCLQLFVKCAFPAGEAKHNPRLMEIGKDIARKCKGLPLAVVSLGCLLRARPGESEWKKVRDSEIWKVNPQDDDGILAALKLSYNHLSSGLKQCFSYCSIFPKGYEYTNLELISFWMAHGLLQTKNEDEEPEDLGEFYIQELVSRSFFECAAEEQLVIDGLISEELELLGINFFKMHDLVHDLAVFTMQSERAVVKFKSTNIKEKVQHLSFSDSGEGVPTFGKMPSKIRTIGFWHASQKELAITEPFVKWISNKFKYIRVLNIQGSNFQFLPDCFDKMKHLRSLDLSYCQRLEKLPDSICMLHNLEVLNLCRCVSLAYIPKNLLNLISLRILWITTKITDLSFIGIGNLKYLQILILWNCDNLVFLPRDLRHLSALKRLTIEACEEVVSFEDEGEDDENYSLKLERVSIDKLPNLVALPGWLRRAGTTLRYLGISECSSLMALPEWLVNLTSLETLLIADCPNLTLPQHMDRLQNLQNLKIYGCPQLVERCNQNTGSDWHKIAHIPNVELGSV* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3273 874 Pfam Rx N-terminal domain 28 114 IPR041118 -
Mtr4g3273 874 CDD Ubl_MoaD_like 184 225 - -
Mtr4g3273 874 Gene3D - 172 354 IPR027417 -
Mtr4g3273 874 PRINTS Disease resistance protein signature 217 232 - -
Mtr4g3273 874 PRINTS Disease resistance protein signature 292 306 - -
Mtr4g3273 874 PRINTS Disease resistance protein signature 395 409 - -
Mtr4g3273 874 PRINTS Disease resistance protein signature 637 653 - -
Mtr4g3273 874 SUPERFAMILY L domain-like 536 869 - -
Mtr4g3273 874 CDD RX-CC_like 22 154 IPR038005 -
Mtr4g3273 874 PANTHER DISEASE RESISTANCE PROTEIN RP 75 744 IPR044974 GO:0006952
Mtr4g3273 874 Gene3D Ribonuclease Inhibitor 584 753 IPR032675 -
Mtr4g3273 874 Gene3D - 28 143 - -
Mtr4g3273 874 Gene3D - 358 449 IPR042197 -
Mtr4g3273 874 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 75 744 - -
Mtr4g3273 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 459 IPR027417 -
Mtr4g3273 874 Pfam NB-ARC domain 196 446 IPR002182 GO:0043531
Mtr4g3273 874 Gene3D Ribonuclease Inhibitor 787 858 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3273 Mtr-Chr4 46090716 46095111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3273 214 848 WRKY Transcription Factor Family AT5G45050 24.296 8.21e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3273 - - cam:101500245 1430.23