Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3240 ATGGGTAGAGAAGAAGAATCCAAAAAGATGGAAATTGATCTCTCTTTGAAGATAGATAGTGATGATGAGCAAGAAGAAGAAGTAGATCGTGAGCTTGTTAAAGAGGATGATGAGAAGGAAGAAGTACATGAAGCTACAGCTGGTGAAATAGAAGATGATGATGCTTCAGTTATACAACTATCTTTGCAAGATGACACGAAAATAAAACAGTTAAGTGCTTTAGAAATGGAGATGGAAAGTATGAAAGAAGAAAACAAAGCCTTGAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTGCAAACCAAATTTTCAGTCATCCAAGAAAATAATAATAATAAAAGAAAGGATCGTCAACTTTCTCTCTCACTACAAGACAATAATGCAGCCACAAGTGGTGAAGGACCATCAAGATCATTTCATGAGATCTTTAGTCAAAAAATTCAAAGAACTTCATCTCCATTACCACCAAACAATATTAGTGAAGATGATAGTATAAGTGAGAGTGATTTGGGTTTGTCATTGAGGATGCAGACAATAAGCACGTGTCAGAGAGATACTGAAGGCAAAAAAGAACAGTTGGGAAGTTTTGAATCAGTGCAGAATAAAATGCAAAGGGTACATGAGGTGCCTAGTGTTACTACTACTCATGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGACAAAAAATAGCAAAAGGAAATCCATGTCCACGTGCCTACTATCGCTGTACTGTTGCTCCAGGCTGTCCAGTTAGAAAACAAGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCAATGGCTTCAACAGCTTCAGCAGCAGCTTCATTTATGTTACTAGATTCAAGCAATCCTAATATTTCAGATTATGGTTTCACAACCCAACAATCCTTTAATCCTTACACTAATAATAGTTTTCACCACCCATTAAACCAATCTCCAAATATTAGAAGCATCAACCCCAATGATCCATCCCAAGGAATTGTTTTTGACCTCACCAATAACAATAATAATGAACTCAACGAACAGCGACGATTTTCTACTGCAGGTAGCTCCAGCTCCAATATTTCAACTGATCAACCTCGTTTTTCTTGGATGCAAAACAAATACCAACAGCAGAGTAATACTAGCAATGCTAATATTACAATGAACAATTTTCATAACCCTAGAGTAATGGATATTCATGATAGGGTTTGGAAAGGATCAGAAGAAAATAATAACAACAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACACCACTACTCATGGTAGCAACAATTGA 1464 0.3709 MGREEESKKMEIDLSLKIDSDDEQEEEVDRELVKEDDEKEEVHEATAGEIEDDDASVIQLSLQDDTKIKQLSALEMEMESMKEENKALRKVVEQTMKDYYDLQTKFSVIQENNNNKRKDRQLSLSLQDNNAATSGEGPSRSFHEIFSQKIQRTSSPLPPNNISEDDSISESDLGLSLRMQTISTCQRDTEGKKEQLGSFESVQNKMQRVHEVPSVTTTHAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPNISDYGFTTQQSFNPYTNNSFHHPLNQSPNIRSINPNDPSQGIVFDLTNNNNNELNEQRRFSTAGSSSSNISTDQPRFSWMQNKYQQQSNTSNANITMNNFHNPRVMDIHDRVWKGSEENNNNNVSAIASDPKFRLAVAAAISSLMNKESNNTTTHGSNN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3240 487 Gene3D WRKY domain 227 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g3240 487 MobiDBLite consensus disorder prediction 18 34 - -
Mtr4g3240 487 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g3240 487 MobiDBLite consensus disorder prediction 1 17 - -
Mtr4g3240 487 SUPERFAMILY WRKY DNA-binding domain 235 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g3240 487 Coils Coil 71 98 - -
Mtr4g3240 487 Pfam WRKY DNA -binding domain 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g3240 487 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 483 IPR044810 GO:0003700
Mtr4g3240 487 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 483 - -
Mtr4g3240 487 MobiDBLite consensus disorder prediction 1 45 - -
Mtr4g3240 487 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3240 Mtr-Chr4 45840100 45843323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3240 10 383 WRKY Transcription Factor Family AT1G68150 45.128 7.13e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g3240 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3240 - - gmx:100820209 538.495